AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g02919 ATGGCTTCTTCACCAAACAACAACCAGCCATTCGACATTCAACGCTTATTCAACCCACCACCACTTCAAAACCCTAATAACCCCTACCACCACATTCCACCACCGTCTTCCGCCGCCTCGTATCCTCCGCCTGTCTTCCACCACCACCTCCCACCACCACCGCCTTCCACTCTACACCACCAGAGATCCCTGCCGTACACCACCGTTCCTCTCCAACCGCCCAGCCCTAACCCTAACCCTAACCATGGAGCTAGACTAATGGCATTACTAACCGCACCGCCACCGCCGAATAATAATACTAATAATAATATTATGATTCCATCTCAATCTCAATCATCTATGCCTTTGCCGCCAATTCCGACTAGTTTTAACCCTAATTTGAACAATATTTCGGGTCCGGTGCGGATGCCGAGTAGTAAGATGCCGAGGGGGCGGCATTTGGTAGGTGATCGAGTGGTTTACGATATTGATGTTAGGTTGGATGGAGAGGTTCAGCCGCAGCTTGAGGTTACACCGATTACTAAGTACGGGTCGCCCTCGGATTTGGTGGTGGGAAGGCAGATTGCGGTTAACAAGAGTTATATATGTTATGGATTGAAAGCAGGGACGATTAGGGTGCTTAATATTAATACTGCTTTGAGATCATTGCTTAAAGGTTTTGTTCAGGTTGGTACTTTTCGTATACGCAGTGCAAGCACGGATGGAGGAATTTATGTATGGAAGATTTTAGAAGGTCCTGATGAGGAAGATAAGCCACAGATAACAGGAAAGATAGTTACTGCAGTCCAAATTCTAGGAGTTGGGGAATATGTTCATCCTAGGGTTTGTTGGCACTGTCATAAACAAGAAATTCTTGTAGTGGCAATTGAGAATCGTATTCTTAGATTTGATACTACAAAGGTTGGGAGAGGTAAAGGATATTCAGCAGATGATCCTCTCATATGCCCTATTGATAAGTTGATTGATGGAGTTAGTTTTGTTGGTAAGCATGATGGTGAAATTACAGATCTATCCATGTGTCAATGGATGACTTCGCGTCTAGTTTCTGCTTCAGTAGACGGCACGATAAAGATTTGGGAGGATCGCAAAGCGTCACCTATTGCAGTACTTAGGCCACATGACGGCCTTCCTGTTAGTTCTGCTACGTTCTTAACCGCTCCACATCGCCCAGATCACATCATACTTATCACAGGGGGCCCGTTGAATCGTGAAGTGAAAATATGGGTCTCTGATAGTGAAGAAGGATTGTTACTTCCTAGTGATGCTGACTCATGGCGTTGCACTCAAACACTGGAATTAAAAAGCTCTACTGAATCAAGACCCCAAGATGCTTTTTTTAATCAAGTAGTTGCATTACCTCAATCGAGTCTTCTTTTACTAGCAAATGCCAAGAGAAACGCTATATATGCTGTACACTTGGATTATGGGCCCAATCCAGAAACAACCCGTTTGGACTACATTGCTGAGTTCACTGTTACTATGCCCATATTGAGCTTTACGGGCACTAGTAATCCGTCACCAAGCGGGTCTCACATAATTCAGGTTTACTGTGTTCAAACACAAGCCATTCAACAATATGCTCTAGACTTATCTCTATGTTTACCACCTCTGGTTTATGATGTGTTTGAGAAATCTGGTTCAACCGTTGATGCAACGGTTCTTGGTTTCGATGAGATGGCTCAGGCTGATGTGGCACCAACATTGAGCCCTAATGAGCTGAAGGATTCCGATACCAATGTTTCATATATTATATCGCCAACAGTTCAATCTAGCCCTAAGTTGTCGGGAAAAGTTTCTGACTTTAGAAGTCCATCTGGTCGATTTGAGCCACGTCAACAACTGAACGGTTATGACGATCAGAAAGTTATGGAGGACATACATTTGGAAACTGCTCGTTCAAATATGTCGAATGCCGCCTCGTTGGATGGTGAGGATGAACGGACGGTTAAGTTTAAGCATCCGACTCATCTAGTAACTCCTGCTGAGTTGATGGCCACGTTATCCTCTGAAGTGAATCATATTGATGGTGTGCATGACGTGGTGGTCAACTCTGATACACAGAATGCTGAGGTGGAGGTTAAGGTTGTGGGTGACCTTAATAGCTCTGCGTATGAAGAAAAGGACAGATCTAGAACTTTCTCATCACAGGCATTAGGGCTAGGGCTTGATATGGCACTTGATAATGAATCTAAACAGTTGGATCAAATAGCAGATGCTCAGGATGAAGTTGATGATGTGGCAACTGATCTAGCTGGATCTGTTGAGATGTCTGTGTCTGGTTTAGTTCAATCTGCGAGTCCCACTTCTCGAGAAAAGAAGAAGAAGAAAAAGAATGCTCAAGTATCAGGTCAAACTTCAAGTGTCTTAAAATCCACTAATTTTTATGATGAGCTAGGAGTGAGTTCCAGTATACTTTCACAAATTCAGTCCATGCAAGAAACACTTAATCAGATTTTGATCAACCAAAAGGAAATCCAGAAACAGATTCCAGTGATTACTGTTGTACCAATAACAAAAGAAGGCAAAAGGATAGAATCAGCCATTGGTAAAAGCATGGAGAAAATTCATAAAGCTAATTCTGATGCTTATTTGGCTCGTTTACAAGAAGAGTTTGCAAAACAAGAAAAGTCAAGCAAAGACCAGCATCAACAAATATCAAATTCCGCCTCAAATAGCCACAAAGAATTTCTTGTAGCATCAGAGAAAATGCTCAAGAAAGAAATGGCTGCAGCGGTGCCACTTGTTGGACGCTCGGTAATTCCAATTATTGAGAAATCAGTGTCGACAGCTGTCACAGAGGCCTTCCAGAGGGGAATAGGTGATAAAGCTGTTAACCAACTGGATAAAGCGGTTAATTCCAAACTGGAAGCTACTGTGTCTAGGCAAATTCAAACTCAATTTCAAACTTCTGGCAAACAAGCCCTACAGGAAGCACTTAGGTTAAGTATGGAGTCTTCTGTTGTTCCCGCCTTTGAGATGTCTTGCAAGTCAATGTTTGACCAAGTTGACTCCACATTCCACAAGGGAATGATGGAACACACAACTGCAACTCAGCAGCAAGTGGAGTCCATGCATTCTTCTTTGGCATTTACTTTGAGGGATACTATCAATTCAGCGTCATCTTTAAGTCAAGCATTGACCAATGAATTTGCTGAGGGTCAAAGGAAGTTAATGGCTCTTTCGGTTGCTGGTGCAAATTCTAAATTAGCAAATCCATTAATAAGCCAACTAAGTAATGGGTCTTTAGGCGTTTTCCATGAAAAGATTGAAGCACCAGTGGACCCCACAAAAGAGCTATCTAGGTTAGCGTATGAGCACAAATTTGAGGAGGCTTTTACTGCTGCCCTGCAAAGAAGCGATGTTCGCATCGTTTCCTGGTTATGCTCTCAGGTTAATCTACAGGGGATATTAACGAGTAATCCTGTTCCTCTGAGCCAAGGGGTACTGCTGTCACTATTGCAGCAATTGGCGTGTGATATTGGAAACGATACGTCTAAGAAGCTTAATTGGATGATGGATGTGGTGGTGGCGATCAAACCAACGGACGGGATAATTGCATTGCATGTGAGGCCCATATTTGAACAAGTGCACTCAATTCTAAACCATCAGATGAGTGTTCCCACAACTTCGGTTGCTGAGCTTTCCAGTATCCGTGTGGTTATGAGACTTATAAACTCTATGTTGGGGAGCATGTAA 3696 43.13 MASSPNNNQPFDIQRLFNPPPLQNPNNPYHHIPPPSSAASYPPPVFHHHLPPPPPSTLHHQRSLPYTTVPLQPPSPNPNPNHGARLMALLTAPPPPNNNTNNNIMIPSQSQSSMPLPPIPTSFNPNLNNISGPVRMPSSKMPRGRHLVGDRVVYDIDVRLDGEVQPQLEVTPITKYGSPSDLVVGRQIAVNKSYICYGLKAGTIRVLNINTALRSLLKGFVQVGTFRIRSASTDGGIYVWKILEGPDEEDKPQITGKIVTAVQILGVGEYVHPRVCWHCHKQEILVVAIENRILRFDTTKVGRGKGYSADDPLICPIDKLIDGVSFVGKHDGEITDLSMCQWMTSRLVSASVDGTIKIWEDRKASPIAVLRPHDGLPVSSATFLTAPHRPDHIILITGGPLNREVKIWVSDSEEGLLLPSDADSWRCTQTLELKSSTESRPQDAFFNQVVALPQSSLLLLANAKRNAIYAVHLDYGPNPETTRLDYIAEFTVTMPILSFTGTSNPSPSGSHIIQVYCVQTQAIQQYALDLSLCLPPLVYDVFEKSGSTVDATVLGFDEMAQADVAPTLSPNELKDSDTNVSYIISPTVQSSPKLSGKVSDFRSPSGRFEPRQQLNGYDDQKVMEDIHLETARSNMSNAASLDGEDERTVKFKHPTHLVTPAELMATLSSEVNHIDGVHDVVVNSDTQNAEVEVKVVGDLNSSAYEEKDRSRTFSSQALGLGLDMALDNESKQLDQIADAQDEVDDVATDLAGSVEMSVSGLVQSASPTSREKKKKKKNAQVSGQTSSVLKSTNFYDELGVSSSILSQIQSMQETLNQILINQKEIQKQIPVITVVPITKEGKRIESAIGKSMEKIHKANSDAYLARLQEEFAKQEKSSKDQHQQISNSASNSHKEFLVASEKMLKKEMAAAVPLVGRSVIPIIEKSVSTAVTEAFQRGIGDKAVNQLDKAVNSKLEATVSRQIQTQFQTSGKQALQEALRLSMESSVVPAFEMSCKSMFDQVDSTFHKGMMEHTTATQQQVESMHSSLAFTLRDTINSASSLSQALTNEFAEGQRKLMALSVAGANSKLANPLISQLSNGSLGVFHEKIEAPVDPTKELSRLAYEHKFEEAFTAALQRSDVRIVSWLCSQVNLQGILTSNPVPLSQGVLLSLLQQLACDIGNDTSKKLNWMMDVVVAIKPTDGIIALHVRPIFEQVHSILNHQMSVPTTSVAELSSIRVVMRLINSMLGSM 1231
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g02919 1231 MobiDBLite consensus disorder prediction 1 85 - -
Bial4g02919 1231 SMART WD40-4 321 360 IPR001680 GO:0005515(InterPro)
Bial4g02919 1231 MobiDBLite consensus disorder prediction 594 613 - -
Bial4g02919 1231 MobiDBLite consensus disorder prediction 758 784 - -
Bial4g02919 1231 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 1 1230 IPR045152 GO:0000932(PANTHER)|GO:0031087(PANTHER)|GO:0031087(InterPro)
Bial4g02919 1231 Gene3D - 1144 1230 IPR044938 -
Bial4g02919 1231 MobiDBLite consensus disorder prediction 21 59 - -
Bial4g02919 1231 Coils Coil 808 828 - -
Bial4g02919 1231 SUPERFAMILY WD40 repeat-like 187 479 IPR036322 GO:0005515(InterPro)
Bial4g02919 1231 Gene3D - 159 475 IPR015943 GO:0005515(InterPro)
Bial4g02919 1231 Pfam Enhancer of mRNA-decapping protein 4, C-terminal 1102 1207 IPR049404 -
Bial4g02919 1231 FunFam Enhancer of mRNA-decapping protein 4 1144 1230 - -
Bial4g02919 1231 Coils Coil 864 884 - -
Bial4g02919 1231 ProSiteProfiles Trp-Asp (WD) repeats profile. 327 369 IPR001680 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g02919 K12616 enhancer of mRNA-decapping protein 4
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Event-related genes

Select Gene_1 Gene_2 Event_name
26433 Bial15g01826 Bial4g02919
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr4:66611413 Bial4g02919 Bial-Chr4:66876533 transposed
Bial Bial-Chr15:62636319 Bial4g02919 Bial-Chr4:66876533 wgd