AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03040 ATGCAGAGATTTCATGTGCCAAAAATGATTACAGTTTCTGCTTTGTCAAGCAAAACTATAAGAGGCAAGAAGGTCGGAGAATTACCAGGAAATTCACAATCAGATGAACTGAATGATTCTGAAAAGTTGTCTGAAAAAGGGTTCAAGGCTGTAAGTCAGCAGGAGTATATCAAACGACTGCATGAACTTAAAGATGAGATCACGCATTCTTGGCGTTCTGGTGATCGTGTAACATCTTTAAAGTTGTCAATCAAGGTTGCTAGGCTTCTGATGGACACATGTGTGGCACAATTTTATCCAACTTTATTTGTTCTAGCTACCGATATAATGGACATGTTAGGTGATATGGTATGGGAGCGAATTAGGGAGAAAGCTGAGTTTGCAGATGACGGGACCAAGATTTGCACTTTATCAGATGACTTTAAAGCAAATAATATATGCATTGAAGCCAAAGAGACATGCAATAACTGGTTCAGAAAAATTGCTTCCATTCACGAGCTTCTTCCACGCATCTATCTTGAGCTTGCTATATTGCCATGCTGGCAGTTCCTGCGTGATGATGTCACGGATGACCTCATGCGTCTGGTTATGATGATAAGAGGAATTGCAGATCCATTGGCATCAGCTTACTGTCGCTTCTTTTTGATTCATCGTGCCCAGAAACTTCCCCAACGCGATACAGGGCATCTAGTAACTTGCATAAGTGATCAAAAAATTATACTGAAGCAAATTGTATCTACAAGAGTAACCAAGTATGGGAACTTTTTGGGAGATCACAAGTTGCTTATTAGCTTGATGGAACCAACAATTGAGTATACTATGAGATGCATTTTTAAGGATCCAAACAAGGTTGCTGATATGATTGTGAGACTTGAGTTAGGGAAAAGCCCGTTAGAGTTAAATGGGAAAGCTCCTTTGATATCAATAATCCTGCATTATTTACTCAAGGAGCTTCCAATTGAAGTAGTTTGTTCTAATGCTTTAGAAATTCTTCACCTTGTTGACTGCAGTAGTGATTTTTCATTTGACCAGTGTTTAAATTACAAGATGCTTGGATTAAAGCTTTGTGAGGGAACAGATCAACTGAACATGGTTGATGCAGTAATCGATGAAGTAATTCAGGCTGCTAACAAAAGGAAGATTCTTGATGAGTACTTGAAGATCTTGGATGCCTATATGGATATTATTATTTATTATAAGCTGGATCAATCTCTAAGTTCTATTCTAAGTGAAATATATGAAAGATCGTGCAATGAAGTGGTTACCGAAGATGAAATGGCTAGCCTGCAATCAATCGTTGTGAAGCTGGTCACACATTTTGATGACATGAAATATGTTTTTGATCTGGATTATTTTGTTGACATATTAGATGTCATGAATGGGAGTTCAAGAAGCATTGTATGTATGCACATCCTCACTAATGCCACAAGAAAGGATCGCATTGATGATCCGACCACTGTAAAACTGCTTTTTGATGTTGCTCAGTCTCTGCATGATAATGCAGACTTTTCAAACATGAGACAGGATGATAATCAACAGGCAGAGCGTTTGGTTGCTCGTTTTGTTGATAAGGTTGACCATGGTATGGATTTGGATCGCCATTTGACTTTCTTGGTTGAGTGTCGTGGAGCTTTCAGTAGCATGAATGATTTGAAGGAGATTCTTGTTCATTCAAGCAATCTTTTAGCTACCAGAGCTTTGAAAGAGAAAAAAGATAATCTCAATTTTATAAAATCTTGCATCACTTTTAATGAAGTTACAATACCATCTATCCCATCTTATTCCAGGCAGTTAATCTTATATCTTGAAACCGCAGAGATTTGTTTGTTTGGAGGCTTGATTTCTCATTCAGATGGACTTCTAGATTCTGCAGTCTGCTGCTTACAAAATGTTTACTTGGTAGATGGTTTGAAGAAATCCAATGAAGATGCTGATAGTATTGTTTCATTAACTAGAAAGCTGTGCAGCTTCATGCTCATGGTTCCAGGTAATTCGGAACAAGGAGCTATGTATATTCCAAAGAGCATATTATCATTGCTTGATTCACAATCATGGGTTACACCAAAACTAAGGATAAGGGTATTATGTTCTCTTCTTTCATTAACTGCTACATTTGCTCAAAATGAGCTCCCATATCATGCAATTCACGAAGAGGTTATTAGCAATGATCGTTTATTTCTTGGTGATGCAACGTATTGTCAAGAACTCAGGTCTTTATCTAGCGTTATTATTCAAAACATGGTTGATACTATTGCACAAGAATCTTCACAGGTTACACGAGGAAAACTGGCACTTAAAGCTTGCAATTGCATCGCCTCATTTTTGAAAGTGAATGTTGAGATATCGTCGGTATGCTCTAAGTTAATGGAAACGGCTGTATCATGTCTTGGAGGCGATGACAAATATTTGCAGTCAACTACTGATTTTGTGCACAAACAGTCTCCAATATCTGTTGGTGGAGAATGA 2466 37.83 MQRFHVPKMITVSALSSKTIRGKKVGELPGNSQSDELNDSEKLSEKGFKAVSQQEYIKRLHELKDEITHSWRSGDRVTSLKLSIKVARLLMDTCVAQFYPTLFVLATDIMDMLGDMVWERIREKAEFADDGTKICTLSDDFKANNICIEAKETCNNWFRKIASIHELLPRIYLELAILPCWQFLRDDVTDDLMRLVMMIRGIADPLASAYCRFFLIHRAQKLPQRDTGHLVTCISDQKIILKQIVSTRVTKYGNFLGDHKLLISLMEPTIEYTMRCIFKDPNKVADMIVRLELGKSPLELNGKAPLISIILHYLLKELPIEVVCSNALEILHLVDCSSDFSFDQCLNYKMLGLKLCEGTDQLNMVDAVIDEVIQAANKRKILDEYLKILDAYMDIIIYYKLDQSLSSILSEIYERSCNEVVTEDEMASLQSIVVKLVTHFDDMKYVFDLDYFVDILDVMNGSSRSIVCMHILTNATRKDRIDDPTTVKLLFDVAQSLHDNADFSNMRQDDNQQAERLVARFVDKVDHGMDLDRHLTFLVECRGAFSSMNDLKEILVHSSNLLATRALKEKKDNLNFIKSCITFNEVTIPSIPSYSRQLILYLETAEICLFGGLISHSDGLLDSAVCCLQNVYLVDGLKKSNEDADSIVSLTRKLCSFMLMVPGNSEQGAMYIPKSILSLLDSQSWVTPKLRIRVLCSLLSLTATFAQNELPYHAIHEEVISNDRLFLGDATYCQELRSLSSVIIQNMVDTIAQESSQVTRGKLALKACNCIASFLKVNVEISSVCSKLMETAVSCLGGDDKYLQSTTDFVHKQSPISVGGE 821
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03040 821 PANTHER ESOPHAGEAL CANCER ASSOCIATED PROTEIN 1 813 IPR029705 GO:0005768(PANTHER)|GO:0032456(PANTHER)|GO:0032456(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03040 K25731 VPS35 endosomal protein-sorting factor-like
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Event-related genes

Select Gene_1 Gene_2 Event_name
189196 Bial4g03040 Bial16g02468
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:64160765 Bial4g03040 Bial-Chr4:69521140 wgd