Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial4g03047 | ATGGCGTTTCCAATATTTGCTGGAAATCTATACCTATCAATTAGGACTCCTAATTCTAAGGTTCATGTATTTCAGGAAAAGAACATCGATTCACAAGGTCCGGATGACGTGAACAATGATACCATACCATCAGCATCACTGCTAAAGCAGTTAGCCATAGGTGTTGAGACCACAAAAATTGTAAAGTCAATGAAGGATTTGATGATATTAGCTAGAGATTATTCACCAGCGAAACAGAAATCCGGTTTGAGTTTATCTGCCGTCAAGTCATTCGTCGTTGGTGAGAAAGAAGATAAGTTCGCTGCTGATTTTGGTCGTTACGAAAAAGTAATGTCTTTTATGCATTCGCTCACCGATCCAGAAGGACATATTTCAAGAAGGAAAACAAGGTCTCGTTTGGATACAACGACAGTCGTTACTAAGTATTTCAAAGAACTTCATGGTGCACCTCCAGACAGCTTTGTTCCCGAACTTGCTGAAGCGATGGGAAGCATAAAAACTTTGAAGAAAATGGCATTGTTTTGGTGTACGGTTGTTATGGAACTGAGAAATATATGGAGTGAAGGAAAACATATTCCTGGAATCCCAACAGATGAAATACCAAATTTAAACACCTGTCTCTTACATCAACAGTTACAGGTTATCAACTGTTGTGTTTCTAGGAAACGACGTCGTGCTATTGCCACTGCGTCATTAGATTCTGTTCTGAAACAAGCCGATGATAATGCTGGCGTGTCACGTCCTTCTAAGGATATCATTCCAGAAAGCCCTGTTATGTATGCTCGAGATAACTCTGGGAAGTTCGTGCTTCGGTTAGGAGCTGATAAACGACTTGAAAACACAACTTTGTTGGATACCGGTGAGCCTGTGTACACACCGGTGATGCAGGAATGGCCTTTGCTCACAGAAGATGTTATAAAAGAAACCGAAGAATTTGTATTACGTACAGGGAGTGTTGGTGCAGGGTGTTCTCAGCTTCTATCTGATATGCAGGCTTTCAAGGCAGCAAATCCAGGGTGCATATTAGAAGATTTTGTAAGATGGCATTCGCCTCCTGATTGGACGGAAACTTGTGATGACGGTAAAGATGTTACGGTTGGTGATAATTCGCCTTCTAGAGGACACCTGAGTACACGTATGCAGAAAGAAGGTAATTTGTGGTTAGAATTATGGAAAACCGCAAAACCGATACCTGCTGTTAGACAGTCTCCATTATACTATGAGGATTTATCTGTTGAAGGAATTTTGAATGGATTGGAGAATATTTCACCTTCAAGTTTGTTTGAGCAGTTGTTTCTTTCACTTCTAAGTTCCGGATGCGCAATTGTTGAGACGAGAGTCTCGAGTAACGAATTTCTGTACAAGATGTTCAAAGAGTGCAAAGACTACATTGTCCTTGTTTGTCAAAGCAAAAGTTGGGTCGAGAAAGCCAACGATATATGCCAAGTGTATGAGACAATGGTGGTGATGGCATTGAACCCGAATAAGGTTATGAGGATCATGAACGCACCGTCTACTGATCAGACTCCTGCAAATGAGGAACCGAGTAACTTTTGGAAAACATCATCAAAGAACCAAAAAGATAATGCAAGTCCGCAGTCCCCAACAATATTTTCAAAGAAGCCGCCAAAACCGATCCTTTGCTGA | 1647 | 41.11 | MAFPIFAGNLYLSIRTPNSKVHVFQEKNIDSQGPDDVNNDTIPSASLLKQLAIGVETTKIVKSMKDLMILARDYSPAKQKSGLSLSAVKSFVVGEKEDKFAADFGRYEKVMSFMHSLTDPEGHISRRKTRSRLDTTTVVTKYFKELHGAPPDSFVPELAEAMGSIKTLKKMALFWCTVVMELRNIWSEGKHIPGIPTDEIPNLNTCLLHQQLQVINCCVSRKRRRAIATASLDSVLKQADDNAGVSRPSKDIIPESPVMYARDNSGKFVLRLGADKRLENTTLLDTGEPVYTPVMQEWPLLTEDVIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTETCDDGKDVTVGDNSPSRGHLSTRMQKEGNLWLELWKTAKPIPAVRQSPLYYEDLSVEGILNGLENISPSSLFEQLFLSLLSSGCAIVETRVSSNEFLYKMFKECKDYIVLVCQSKSWVEKANDICQVYETMVVMALNPNKVMRIMNAPSTDQTPANEEPSNFWKTSSKNQKDNASPQSPTIFSKKPPKPILC | 548 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial4g03047 | 548 | MobiDBLite | consensus disorder prediction | 505 | 548 | - | - | |
| Bial4g03047 | 548 | PANTHER | RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT | 37 | 524 | IPR045700 | GO:0005096(InterPro)|GO:0005096(PANTHER)|GO:0043547(InterPro)|GO:0043547(PANTHER) | |
| Bial4g03047 | 548 | MobiDBLite | consensus disorder prediction | 505 | 537 | - | - | |
| Bial4g03047 | 548 | Pfam | Rab3 GTPase-activating protein catalytic subunit | 271 | 420 | IPR026147 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial4g03047 | K18270 | Rab3 GTPase-activating protein catalytic subunit |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 189198 | Bial4g03047 | Bial16g02475 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr20:68420876 | Bial4g03047 | Bial-Chr4:69574970 | dispersed | |
| Bial | Bial-Chr4:69574970 | Bial8g02987 | Bial-Chr8:71789495 | dispersed | |
| Bial | Bial-Chr4:69574970 | Bial4g03049 | Bial-Chr4:69592655 | proximal | |
| Bial | Bial-Chr16:64228149 | Bial4g03047 | Bial-Chr4:69574970 | wgd |