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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03243 ATGGCAAGAGACAAAGCATTGTTTCTAGTAGTTTTGTCAACAATCGCTATTTCTGGTGCACTCACACAAGTCAAAGCTTATTCAAGCTATTATTGTAGCCCTTGGTCTCGTTGCCAAGGCCAAACCCTCTATTGCCCCTCTGAATGTCCCTCTAGCGAGTCCAACGACCCCAAGGCTAAAGTTAACCAACATTTCTCCTTGATTTCCGACACCAACCTCCAAATAAACGGTCGATTCATAGGCCATCGCCCCTTAGGCCGGTCCCGAGACTTCACATGGATCCAAGCCCTTGGTCTCCTCTTCAATTCCCACACCTTCTCTCTAGAAGCAACCAAATCCGCCACATGGGACAACGAAATCGACCACATTAAACTCTCATACGACGGACAAGACATTTCCTTACCCGTTGGCGGTCTTTCCACGTGGCAATCACCAGAGGAAAATATAAAGATTGAGAGGACTTCCAACATGAATAGTGTGATGGTGACCATTCCTGGAGTGGTTGAGATTTTGGCTAATGCGGTCCCAGTGACGGCTGAAGACGATAGAATCCATGGTTATAATGTTCCTAATGACAATTGTTTTGTTCACTTGGAAGTTCAGTTTAGGTTTTTCGGTTTATCTGACAATGTTGAAGGAGTGTTGGGACGGACATACCAACCGGATTTTAAGAATCCTGCGAAACCAGGAGTGGCAATGGCAGTTGTGGGAGGTGAAGATAAGTATAAAACGAGCTCTTTGTTGTCGGCGGATTGCAAAAACTGCATCTTTGATTCGAGTAATGTTGCGGGGAAAGATAAGGAGATGGTTATGTTGGATTGTACTGCTAAAGGGATGTTCCATGGGAATGGGATTGTGTGCAAGAAATGA 870 45.17 MARDKALFLVVLSTIAISGALTQVKAYSSYYCSPWSRCQGQTLYCPSECPSSESNDPKAKVNQHFSLISDTNLQINGRFIGHRPLGRSRDFTWIQALGLLFNSHTFSLEATKSATWDNEIDHIKLSYDGQDISLPVGGLSTWQSPEENIKIERTSNMNSVMVTIPGVVEILANAVPVTAEDDRIHGYNVPNDNCFVHLEVQFRFFGLSDNVEGVLGRTYQPDFKNPAKPGVAMAVVGGEDKYKTSSLLSADCKNCIFDSSNVAGKDKEMVMLDCTAKGMFHGNGIVCKK 289
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03243 289 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 60 289 - -
Bial4g03243 289 Pfam Root cap 201 257 IPR009646 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03243 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189285 Bial4g03243 Bial16g02640
189626 Bial4g03243 Bial24g02161
363300 Bial12g02303 Bial4g03243
374387 Bial24g02161 Bial4g03243
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr4:74239434 Bial6g01143 Bial-Chr6:18572580 dispersed
Bial Bial-Chr12:53336802 Bial4g03243 Bial-Chr4:74239434 wgd
Bial Bial-Chr16:68339498 Bial4g03243 Bial-Chr4:74239434 wgd
Bial Bial-Chr24:52191663 Bial4g03243 Bial-Chr4:74239434 wgd