AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial4g03245 | ATGAGACAACTCTCTCTTAAACTCGCCCTTGTTTCTGCCAGCGTCGTATCCACCGCTGTCCTGATCAACCTCTTACAACCCATCATTATGAACCTCACAATATCTGACCTCCCTATAATATACACCTCCTTCATATCTTGGCTAAAACCACCTTATCTTTACGTTGTTATTAATTGTATTATTATTACCATCGTTGCTTCTTCAAGGTTACAAACCAAGGGTGACGGGTTTCACGACCCAGTCTCGACGTACCCTGTACCGGTTCATGAACTGGTCAATGAACCGGTCAAGAACGTCGAGATACCACCGGTTCATGAATTGGTCAATGAACCGGTGGATATTGAGGTCGATGGGTTTGTCGGTGAGACGAAGTTTGTTGGTGAAATGTTGGATGATGATATGAAGATAGCTAAGGAAGCTTATGAAGAAATTAAGAGAAATAAGGTTAATAAATCGGTTATTTCGATGTCGGCGTGGACACCTTCGGATGTTAATCAAGTTGGCTTGCGTTCTCCAGTGGAGAAACCGGCTGCTTCTACGCGATTTAGCAGCCGGAAAACTGCGAAAGCCGTTCCCGAAGTCGGTAAAGCATTGGGAGTTGCAAAACCAAAGCGTCAAGACACGCTGGAGACCACGTGGAAGACAATAACCGAGGGTCGCTCAGTTCCGTTAACCAGACACCTACGTAAATCCGACACGTGGGAGACCCGTGAAACTCGTACCTCAGATCATTTCTTAATTAATAATAATAATAATATTAATAATAGTGATATTAATAATATTCACTTAATGAAAAAATCAGAAACGTTTGATGTCAACCGAAGCCGAAAACCGGTTAAACCACCTGCGCCACAGTCGAAACTGAACCGGACGGGTGGGTTAAAGAAGGAACCTTCGTTGGGACAAGAGGAGTTGAACCGGAAAGTGGAAGCGTTTATTAAGAAGTTTAATGAGGATATGAGGTTACAAAGACAAGAGTCGTTGAATCAGTATATGGAGATGATTAATCGCGGGGCTCATTAA | 1023 | 43.21 | MRQLSLKLALVSASVVSTAVLINLLQPIIMNLTISDLPIIYTSFISWLKPPYLYVVINCIIITIVASSRLQTKGDGFHDPVSTYPVPVHELVNEPVKNVEIPPVHELVNEPVDIEVDGFVGETKFVGEMLDDDMKIAKEAYEEIKRNKVNKSVISMSAWTPSDVNQVGLRSPVEKPAASTRFSSRKTAKAVPEVGKALGVAKPKRQDTLETTWKTITEGRSVPLTRHLRKSDTWETRETRTSDHFLINNNNNINNSDINNIHLMKKSETFDVNRSRKPVKPPAPQSKLNRTGGLKKEPSLGQEELNRKVEAFIKKFNEDMRLQRQESLNQYMEMINRGAH | 340 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial4g03245 | 340 | Pfam | Domain of unknown function (DUF4408) | 38 | 70 | IPR025520 | - | |
| Bial4g03245 | 340 | MobiDBLite | consensus disorder prediction | 273 | 302 | - | - | |
| Bial4g03245 | 340 | Pfam | Cotton fibre expressed protein | 302 | 337 | IPR008480 | - | |
| Bial4g03245 | 340 | PANTHER | COTTON FIBER (DUF761) | 7 | 338 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial4g03245 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 189286 | Bial4g03245 | Bial16g02641 | |
| 189627 | Bial4g03245 | Bial24g02163 | |
| 363303 | Bial12g02304 | Bial4g03245 | |
| 374388 | Bial24g02163 | Bial4g03245 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr16:1138250 | Bial4g03245 | Bial-Chr4:74273561 | dispersed | |
| Bial | Bial-Chr18:20443671 | Bial4g03245 | Bial-Chr4:74273561 | dispersed | |
| Bial | Bial-Chr21:49230223 | Bial4g03245 | Bial-Chr4:74273561 | dispersed | |
| Bial | Bial-Chr4:1243342 | Bial4g03245 | Bial-Chr4:74273561 | dispersed | |
| Bial | Bial-Chr4:74273561 | Bial6g01147 | Bial-Chr6:18611256 | dispersed | |
| Bial | Bial-Chr12:53345272 | Bial4g03245 | Bial-Chr4:74273561 | wgd | |
| Bial | Bial-Chr16:68347628 | Bial4g03245 | Bial-Chr4:74273561 | wgd | |
| Bial | Bial-Chr24:52200724 | Bial4g03245 | Bial-Chr4:74273561 | wgd |