AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03247 ATGACTGCAATCTTATCCTTCACCACTACTACAACACCCACAACCCACTTCAAATTCAAATCAATAAAAAACTCAAAAACAACCGTATTGCCATTACAATCATCCTCAAGAATCACCACAATACCTAACACCCACCAACACTCCACTCCATTATTCATCCCAGAGGTTGAAAGTGCAGTTGATGCATTGTATCCTGAATTTAGAGCGGTTGATAACCTGGTGGCGTGTAATACGTCTAGAGTTCTTAAAGCTTTTCAGAATGCTAGGGTTGGATCACATCATTTTGGTGGTTGCACTGGCTATGGCCATGAAGAAGCCGGAGGCCGAGAAGCCCTTGATCAAGCTTTTGCAGAAATATTTGGTGCCGAATCCGCAATTGTTCGGTCACAGTTTTTCTCAGGGACTCATGCTATTACATGTGCTCTTTTTGCTTTCTTAAGGCCAGGTGATGAGCTTTTGGCGGTTGCGGGTGCTCCTTATGATACACTTGAGGAAGTTATAGGAATCAGAGATAGCAACGGATTAGGTTCTTTAAAAGATTTTGGAATCAGTTATCGAGAAGTTGCACTTGCAGAAGATGGAGGTCTTGATTGGGACGCTCTTGAGGTTGCTTTAAAACCTCAAACAAAATGTGCACTTATTCAAAGATCATGCGGTTATTCTTGGCGTAAAAGTTTAAGTGTGAATGAAATTTCTAGAGCAATAAACATCATCAAGTCGCAAAATCCAAATTGTTTAGTCATGGTGGATAATTGCTATGGTGAATTCACAGAAGCCATTGAACCTCCAATGGTGGGTGCAGATCTTATTGCAGGAAGTTTTATTAAAAACCCCGGTGGAACAATCGCGCCATGTGGCGGATACGTTGCCGGGAAAGAAAAATGGGTAAAAGCCGCAGCAGCCCGTCTCTCGGCACCGGGTCTCGGGGTTGACTGCGGGTCAACTCCCGGTGATATTATGAGAACATTCTTTCAAGGGTTATATCTCTCGCCTCAAATGGTTGGCGAAGCAGTTAAGGGCGGGTTACTTATCGCCGAAGTTATGTCTACCCAAGGTTACAAAGTGCAACCGCTTCCTCGAGTACCCCGTCACGACATAGTACAGGCGATACAACTGGGAAGCCGAGAGAAGCTTCTTGCGTTCTGTGAGGCGGTACAAAGAAGCTCGCCTGTAAGCTCGTATACAAAACCGATTGCGGGCATGACAGCTGGTTATGCGTCGGAGGTGATTTTTGCTGACGGGACGTTTATAGATGGCAGCACGAGTGAGCTCTCGTGTGACGGGCCGTTAAGAGAGCCGTTCTGCGTCTTCTGTCAGGGTGGCACACATTGGACTCAGTGGGGGTTAGTTTTGGGTGAGGTTTTGAATTCTTTGTAG 1377 45.53 MTAILSFTTTTTPTTHFKFKSIKNSKTTVLPLQSSSRITTIPNTHQHSTPLFIPEVESAVDALYPEFRAVDNLVACNTSRVLKAFQNARVGSHHFGGCTGYGHEEAGGREALDQAFAEIFGAESAIVRSQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDSNGLGSLKDFGISYREVALAEDGGLDWDALEVALKPQTKCALIQRSCGYSWRKSLSVNEISRAINIIKSQNPNCLVMVDNCYGEFTEAIEPPMVGADLIAGSFIKNPGGTIAPCGGYVAGKEKWVKAAAARLSAPGLGVDCGSTPGDIMRTFFQGLYLSPQMVGEAVKGGLLIAEVMSTQGYKVQPLPRVPRHDIVQAIQLGSREKLLAFCEAVQRSSPVSSYTKPIAGMTAGYASEVIFADGTFIDGSTSELSCDGPLREPFCVFCQGGTHWTQWGLVLGEVLNSL 458
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03247 458 Gene3D - 104 312 IPR015421 -
Bial4g03247 458 Gene3D - 52 103 - -
Bial4g03247 458 Gene3D - 313 458 - -
Bial4g03247 458 Pfam Methionine gamma-lyase 57 456 IPR009651 -
Bial4g03247 458 PANTHER CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME 22 458 IPR009651 -
Bial4g03247 458 SUPERFAMILY PLP-dependent transferases 81 430 IPR015424 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03247 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189288 Bial4g03247 Bial16g02646
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:68467394 Bial4g03247 Bial-Chr4:74429943 wgd