Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial4g03275 | ATGGCCGGCGTTCTCGAAACCCTAACCGTTCCTCGCGCCTCTCTAACTCCGATCGCCTCTTCTCCGATCACTCAACTCTCACTTCGCCGGAACTTCTTTCTGCCGGAATCACGAGCCTCCAAATTAAACGTCAGTTCCTTCCGTTCGTCCGGATCCGTCCGATTGACGTCCAAATTCGGCCGCCGCGGCGGACGAATCGTATGCGAAGCTCAGGAAGCGGCCGTTGAAGTGCTTCCCGTGACTGATGGATCATGGCAATCACTTGTTCTGGATTCTAAGCTTCCTGTGCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCGTGTCGCATGATTCACCCGATCATTGATGAGCTGGCGAAAGAGTTCAACGGCAAGCTCACCTGTTACAAGGTGAACACTGATGAGAGTCCTTCAATTGCTACCCAATATGGTATAAGAAGCATCCCAACTGTCATCATCTTCAAAGACGGAGAGAAGAAAGAAGCAGTTATCGGCGCTGTTCCAAAAACTACTTTGTCAACCAGCATTGAGAAGTTTCTGTAA | 543 | 50.64 | MAGVLETLTVPRASLTPIASSPITQLSLRRNFFLPESRASKLNVSSFRSSGSVRLTSKFGRRGGRIVCEAQEAAVEVLPVTDGSWQSLVLDSKLPVLVEFWAPWCGPCRMIHPIIDELAKEFNGKLTCYKVNTDESPSIATQYGIRSIPTVIIFKDGEKKEAVIGAVPKTTLSTSIEKFL | 180 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial4g03275 | 180 | ProSiteProfiles | Thioredoxin domain profile. | 67 | 180 | IPR013766 | - | |
| Bial4g03275 | 180 | PRINTS | Thioredoxin family signature | 96 | 104 | - | - | |
| Bial4g03275 | 180 | PRINTS | Thioredoxin family signature | 104 | 113 | - | - | |
| Bial4g03275 | 180 | PRINTS | Thioredoxin family signature | 144 | 155 | - | - | |
| Bial4g03275 | 180 | PANTHER | GEO12009P1 | 53 | 180 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) | |
| Bial4g03275 | 180 | Pfam | Thioredoxin | 77 | 177 | IPR013766 | - | |
| Bial4g03275 | 180 | Gene3D | Glutaredoxin | 76 | 180 | - | - | |
| Bial4g03275 | 180 | CDD | TRX-family | 84 | 177 | - | - | |
| Bial4g03275 | 180 | ProSitePatterns | Thioredoxin family active site. | 97 | 115 | IPR017937 | - | |
| Bial4g03275 | 180 | FunFam | Thioredoxin | 71 | 180 | - | - | |
| Bial4g03275 | 180 | NCBIfam | thioredoxin | 81 | 179 | IPR005746 | GO:0015035(InterPro) | |
| Bial4g03275 | 180 | SUPERFAMILY | Thioredoxin-like | 70 | 180 | IPR036249 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial4g03275 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 25899 | Bial13g02587 | Bial4g03275 | |
| 32786 | Bial3g03265 | Bial4g03275 | |
| 189630 | Bial4g03275 | Bial24g02180 | |
| 374391 | Bial24g02180 | Bial4g03275 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr14:4932005 | Bial4g03275 | Bial-Chr4:75178645 | dispersed | |
| Bial | Bial-Chr1:36684847 | Bial4g03275 | Bial-Chr4:75178645 | dispersed | |
| Bial | Bial-Chr2:8190937 | Bial4g03275 | Bial-Chr4:75178645 | dispersed | |
| Bial | Bial-Chr4:75178645 | Bial6g03031 | Bial-Chr6:74631479 | dispersed | |
| Bial | Bial-Chr24:52328868 | Bial4g03275 | Bial-Chr4:75178645 | wgd | |
| Bial | Bial-Chr3:77107818 | Bial4g03275 | Bial-Chr4:75178645 | wgd |