Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial4g03317 | ATGACAACTCGTATCCTCCTTCGCACTCTCCTCTCCTCCGTACACCAAACCCTAACCCCAACTCGTTCCTTCACCACCACCTCCCACTTCCTCCGCCTCCGTCCTCTCGCCGTCGCCGCCGCCAATCTCCGCCAGCACTCCCTCACCGCCGCCAATACCGTCCGTACGTTCTCCACACGGCCGACGACTTCCTCGTTAAACGACTCGAACCCTAACTGGTCCAATAGGCCTCCCAAGGAGACGATTCTTTTAGACGGGTGTGATTTTGAGCATTGGCTTGTGGTCGTTGAGAAACCCGAAGGCGAGCCGACGAGAGATGAGATTATTGAGTCGTATATTAATACTCTTGCTAAAGTTGTTGGCAGTTATGATGAAGCAAGGATGAAAATCTACTCAGTTTCAACTAGATGTTATTTTGCTTTTGGTGCTCTAGTGTCTGAAGAACTGTCTTATAAGCTTAAAGAATTACCCGGAGTTCGTTGGGTGCTACCTGATTCTTATCTTGATGTTAAGAACAAGGATTATGGAGGTGAACCATTTATTGATGGAAAGGCGGTACCTTATGATCCCAAGTACCATGAAGAGTGGATTAGAAACAATGCTCGGGCCAATGAGAGAAACAGGAGGAACGACAGGCCTCGCAATTTTGACCGGTCAAGAAATTTCGAGAGAAGACGAGAAAACATGCAAAGCAACCGTGGACCGCCTGGTCCACCGCCCAACAACATGAGCGGCCCACCACCGCCCAACAACATGAGCGGCCCGCCACCGCCCAATAACTGGAATGGCCCACCACCGCCCAATAACATGAGCGGCCCACCACCAACTAATAACTGGAATGGGCCACCACCGCCAAACAATATGAGTGGCCCACCACCACCCAATAACTGGAACGGGCCACCACAGGCCAATAACTGGAACGGGCCACCACCGCCCAACAACATGAGAGGTCCACCACCGCCCAATAACTACCAGCAGCAGGGCCGGTATGGGCCGGGACCAGTTGCGGGACAGGCCCAGGATGTAGGTGGAAGAGACATGCCCCCTCAAGCACACTATGAATGA | 1065 | 52.49 | MTTRILLRTLLSSVHQTLTPTRSFTTTSHFLRLRPLAVAAANLRQHSLTAANTVRTFSTRPTTSSLNDSNPNWSNRPPKETILLDGCDFEHWLVVVEKPEGEPTRDEIIESYINTLAKVVGSYDEARMKIYSVSTRCYFAFGALVSEELSYKLKELPGVRWVLPDSYLDVKNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQSNRGPPGPPPNNMSGPPPPNNMSGPPPPNNWNGPPPPNNMSGPPPTNNWNGPPPPNNMSGPPPPNNWNGPPQANNWNGPPPPNNMRGPPPPNNYQQQGRYGPGPVAGQAQDVGGRDMPPQAHYE | 354 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial4g03317 | 354 | MobiDBLite | consensus disorder prediction | 204 | 230 | - | - | |
| Bial4g03317 | 354 | MobiDBLite | consensus disorder prediction | 233 | 319 | - | - | |
| Bial4g03317 | 354 | PANTHER | MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED | 10 | 230 | IPR039206 | GO:0005739(PANTHER)|GO:0016554(InterPro)|GO:0080156(PANTHER) | |
| Bial4g03317 | 354 | MobiDBLite | consensus disorder prediction | 204 | 354 | - | - | |
| Bial4g03317 | 354 | Pfam | Multiple organellar RNA editing factor 1, MORF domain | 89 | 180 | IPR054059 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial4g03317 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 32781 | Bial3g03208 | Bial4g03317 | |
| 189308 | Bial4g03317 | Bial16g02686 | |
| 189637 | Bial4g03317 | Bial24g02201 | |
| 363335 | Bial12g02341 | Bial4g03317 | |
| 374398 | Bial24g02201 | Bial4g03317 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr4:75825562 | Bial6g01219 | Bial-Chr6:21519617 | dispersed | |
| Bial | Bial-Chr12:53707571 | Bial4g03317 | Bial-Chr4:75825562 | wgd | |
| Bial | Bial-Chr16:69497746 | Bial4g03317 | Bial-Chr4:75825562 | wgd | |
| Bial | Bial-Chr24:52579467 | Bial4g03317 | Bial-Chr4:75825562 | wgd | |
| Bial | Bial-Chr3:76641543 | Bial4g03317 | Bial-Chr4:75825562 | wgd |