AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03342 ATGGACACGGTTCGGTCCGAATCCCTCATGCGTTGGGTTTGGGAAGCTAACCGTGGGAACCCGGTTCGTGAAAACGCTACGTTAACATTCGGTACAGACGGAAACCTGGTACTAGCGGATGCGTTGTCTGGCAAACGAATACCGCCAACAAGGGTGTGGTCGGTTTTCAATTGCTTCCAACTGGTAACATGGTTCTTCATGACGGTAAGGGTAATTACTTATGGCAAAGCTTTGATTCCCCAACCGATACTTTCTTGGTTGGTCAAAACCCTTCGAGCTAGTGGTCCGAATAAGCTCGTGAGTCGGGTTTCTGAGGCGAGTAATGTGGATGGACCGTATAGTTTGGTCATGGAGCCAAAAGGGTTATCGTTGTATTACAAAAGTCCCAACTCGCCTCGACCAATGCTTTACTGGACGTCTAGCGAGTGGTTCACCGTTGACCAAGGTAGTTTGGTCAACTTAACTCTTACGCCAGTCCCAGACACTGACGAGGGGTTTCTGTATTACTTGGTGTTCGATTATTTTACCACGAAGTCTTCTTCAAACCGTTACATGGCGTATACACGTTACAATAACACGTTATCGTATCTACGATTAGGGATAGACGGAAACCTTAGATTCTACACGTATAACCCTAATGTGCAAGGTGTGGCATGGGAGCTGGTGTACACGTTTCTTGATCGGGATTCGATTGAAGGCGAGTGTCAATTACCGGGAAGATGTGGGAACTTTGGGCTATGTGAGGATAGTGATCAGTGTGTTGCGTGCCCGACACCAAGTGGGTTAAGTGGTTGGAGGAAAAATTGTGATGTGAAAAAGGTGACGTCTTGCAAAGTGAGTGAGTTTGGGTACTACAAGCTTCAAGGGGTTGATCATTTTATGATCAAGTACACGAGGGGAGATGGTGCGACTAAGCAAAGCGATTGCGAGAGCAAATGCACGAAGGATTGCAAGTGTATGGGGTACTTCTATCACACGGAGGGTTCGAGGTGTTGGATTGCTTATGATTTGAAAACATTAACAAGAGTTGGGAACTCGACACATTTGGCGTACATCAAAACACCCAACAAGTAG 1074 46.55 MDTVRSESLMRWVWEANRGNPVRENATLTFGTDGNLVLADALSGKRIPPTRVWSVFNCFQLVTWFFMTVRVITYGKALIPQPILSWLVKTLRASGPNKLVSRVSEASNVDGPYSLVMEPKGLSLYYKSPNSPRPMLYWTSSEWFTVDQGSLVNLTLTPVPDTDEGFLYYLVFDYFTTKSSSNRYMAYTRYNNTLSYLRLGIDGNLRFYTYNPNVQGVAWELVYTFLDRDSIEGECQLPGRCGNFGLCEDSDQCVACPTPSGLSGWRKNCDVKKVTSCKVSEFGYYKLQGVDHFMIKYTRGDGATKQSDCESKCTKDCKCMGYFYHTEGSRCWIAYDLKTLTRVGNSTHLAYIKTPNK 357
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03342 357 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 11 355 IPR051343 -
Bial4g03342 357 Pfam S-locus glycoprotein domain 149 256 IPR000858 GO:0048544(InterPro)
Bial4g03342 357 Pfam PAN-like domain 299 333 IPR003609 -
Bial4g03342 357 SUPERFAMILY alpha-D-mannose-specific plant lectins 11 143 IPR036426 -
Bial4g03342 357 ProSiteProfiles Bulb-type lectin domain profile. 1 92 IPR001480 -
Bial4g03342 357 CDD PAN-AP-plant 276 355 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03342 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189316 Bial4g03342 Bial16g02727
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr4:76243815 Bial4g03344 Bial-Chr4:76299058 dispersed
Bial Bial-Chr4:76231878 Bial4g03342 Bial-Chr4:76243815 tandem
Bial Bial-Chr4:76243815 Bial4g03343 Bial-Chr4:76271921 tandem