AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03359 ATGGAAAATTTGAAGATAGAAGAAACAATAAACAAGGTTGAAGAAAAATATCGATCATTTCTCTATGAAGAAGCTGAAAACACCCATTGGAGACATGGTGGTCCTCCCATCTATGATGCCGTTAACCAACTCTTCGAACAAGGCAGAACCAAGGTATGGGAAAAAGGGTCGTTAGAAGAAACGGTTCAAAATGCAATAAAATCATGGGAGATGGAGCTTAGCCATAAGACTCGTATACAAGACTTCAAAACTATCAATCCTGAGAAATTCAAGCTTATTGTCAATGGAAGGGAGGGTTTATCAGCAGAGGAAACACTTAAGGTGGGGAGTTACAATGCATTACTGAAGAGTACGCTTCCAGAAGAGTACAAGTACTACAAAGCAGAGGAAGAGACCTTTGAATCATCTCACGACGTCTTTCGATCGGCATTTCCACGTGGATTTGCATGGGAGGTTATAAGTGTCCATTCTGGGCCTCCGGTGATAACCTACAAATTCCGGCATTGGGGTTACTTTGAAGGTCCATTCAAAGGCCATGATCCGACCGGTGAATTGGTTGATTTCTATGGCATGGGAATCCTCAAGGTTGATGAATTCTTGAGAGCGGAAGATGTCGAGATCTATTACGATCCAGCAGACTTGATCTCAAAGCTGATCAAGGGACCGTTGATCTCCGAACAACAAAACGATGACGTGGACAATTCTTCGGCGAACACCAGCAGCTGCCCGTTCAATAAGCAAGCGTGA 747 43.37 MENLKIEETINKVEEKYRSFLYEEAENTHWRHGGPPIYDAVNQLFEQGRTKVWEKGSLEETVQNAIKSWEMELSHKTRIQDFKTINPEKFKLIVNGREGLSAEETLKVGSYNALLKSTLPEEYKYYKAEEETFESSHDVFRSAFPRGFAWEVISVHSGPPVITYKFRHWGYFEGPFKGHDPTGELVDFYGMGILKVDEFLRAEDVEIYYDPADLISKLIKGPLISEQQNDDVDNSSANTSSCPFNKQA 248
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03359 248 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 8 245 IPR053218 -
Bial4g03359 248 Gene3D - 112 219 - -
Bial4g03359 248 MobiDBLite consensus disorder prediction 227 248 - -
Bial4g03359 248 SUPERFAMILY NTF2-like 132 217 IPR032710 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03359 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189330 Bial4g03359 Bial16g02755
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:70813970 Bial4g03359 Bial-Chr4:76763235 dispersed
Bial Bial-Chr16:70838484 Bial4g03359 Bial-Chr4:76763235 dispersed
Bial Bial-Chr4:76763235 Bial7g02816 Bial-Chr7:62676741 dispersed
Bial Bial-Chr4:76738713 Bial4g03359 Bial-Chr4:76763235 tandem