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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03361 ATGAAAGAAGAAGAAATCGAACGGTTAAGAGGACTCATCAGAGACTGCGTCAGCAAACACCTATACTCGTCCGCTATATTCTTCGCGTTCACTTCCGAACCGGCGGACATTTACATGCAAGCACAGGCTCTCTTCCTCGGACGACATTGCCGCCGTGCTTTCCACCTCCTTAATGCTTCTCACATTGTCCTTCGTGATCTTCGGTTTCGTTACCTTGCCGCCAAATGCCTCGTTAAACTTGATGCACTTGATCAAAGCCGATATGGGCCTAGAAACCTGAAGGCTACCTTCATATCTTCAACCTGA 306 48.04 MKEEEIERLRGLIRDCVSKHLYSSAIFFAFTSEPADIYMQAQALFLGRHCRRAFHLLNASHIVLRDLRFRYLAAKCLVKLDALDQSRYGPRNLKATFISST 101
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03361 101 Pfam Anaphase-promoting complex, cyclosome, subunit 3 19 86 - -
Bial4g03361 101 Gene3D Tetratricopeptide repeat domain 1 89 IPR011990 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03361 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189332 Bial4g03361 Bial16g02757
189641 Bial4g03361 Bial24g02209
363348 Bial12g02351 Bial4g03361
374402 Bial24g02209 Bial4g03361
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr24:52668185 Bial4g03361 Bial-Chr4:76781270 dispersed
Bial Bial-Chr16:70856518 Bial4g03361 Bial-Chr4:76781270 wgd