AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03428 ATGAGAGAAGAAGGTATCAGTTCATCTGGTGACCCGTTACTTTTCCCCAATTCACCTCCTCCAACTGCTGCTGCAAGCTCTGCTGGAGCATCATCACCAGCTGTAGCCACCAATGCTGGCAGTGCAGATTGGTTGGGCCACGGTCAGGGGTCCAAAGCTGGTTCACTGTCCAGAATCAGTTCACAGCCCGTGTGGATCTCACTGAGTACAAGTGCTGGTGGTTCAGCTCTCGGTTCATCCAAACCTTCATGCAGACCATGGGAAAGGGGTGATCTTCTAAGACGGTTATCCACTTTCAGCCCTGCAAACTGGTTTGGAAAACCAAAGGCTGCTAGTTCACTTTCCTGTGCTAGAAGAGGTTGGGTGAATGTAGATGTTGATAAGATTCAATGCGAGTCGTGTCGGGAGAATCTGAAATATAACGGACAAGATTCATGGGCTCGTACAGAAGGTGAAAATGATGAAGAGTTTGCTAATTTGCTGGATGAAGGACATAACGCCACGTGCCCTTGGAGAGGAAACAGCTGCGCTGAGAGTCTGGTTCAGTTCCCTCCGACCCCACCATCTGCTCTGATTGGCGGTTACAAGGACCGTTGTGATGGGCTAATTCAGTTTCCTTATTTACCCGTAGTGGCTAACTCGGCTATTGATCAGATGAAGCTTTCTAGAAGTCTAGAAATTGACCGGTTTTTAGTCCAGTCAACTGTTTATCCGGGAGATGTTATGTCTGATTCAGAAATAAGCATATATCTACGTGCCCAGAAGTTGATCAGCTTATGTGGATGGGAGCCTAGGTGGCTTCCAAATGTTCAAGATTGTGAAGAGCATTCGGCTCAATCTGCTAGAAACGGTGGTTCGTTCAGTCCTAAAAAAGATCAAGACCCGTTTCAAGGCCCGAGCAAGAAACGTGTTACTAACTCAACCAAAAAAGGATCTCGGGTCAAGTCAAAGTTTGACTCCGGATCGCTTCTCTTGGATTGCAGCTTATGTGGCGCAACAGTGAGAATCTTGGACTTTGTTCGGGTCAACCTTCCTGCTCGTCTTGCTCCTAACAACATCGATGTTCCTGACACGAGTAAAAATATGGCGGTTACTCGTGGAGCAAGTGCCGCTAGTGCCATTAGCGGCTGGGTGGCGGCTGACGGGGCAGAAGACGAACAGACCGAAGACGTTGGCGAGGCGGCGGTTTCAAACGTTCGGATGGATCTAAATCTCACCATGGGAAGCGGTCTATCTACAGGACACGGGACAAAACGACCGATATCTGAGTTATATCAAGACGGGAATTTAGGTCGGGATCTAGTCATCGGACAACCAGCTGGCAGTGAGGTCGGTGACCGTGCAGCATCGTATGAATCCCGTGGGCCCACTTTTAAACGAAACATTGACGAAGGTGGGTCCACTGTTGACAGACCACACGAGCTCATTCGCCAGGCGGACAGTGTCGAGGGCGTTGTCATTGACCGTGACGGTGATGAAATCAATGACAGTAAAACGTCCACGGGTCCATCTAAACGGGCCTGTGAGTCATCATCCGGTGCAGGCCCAAGTCAGACTTTGTATTTTGACATTGGTCAACCGGGCCCGTCGAGTCAAGGTTACGAACACGCAGCACACGCGTCTTCAGTCATCGCAATGGATACGATTTGCCATAGTGAAGATAATGATTCGATGGAGAGTGTGGAAAACCATCCGGGTTTTAATGATGAGGTCAACTACCCGTCCACGTCAGCAGTCAACCATGACCTGAATGAAACTTACGACATGAACCATAGCACCCAGGGTCAACAAAGCACGTCGGTTTGGGTCAACAGTGAAATAGGTGTAAGCAGCACTAACTATGAAGAAGTGGTGAATACTGATGCCGCTAGGCGGGAAGGACCAAGCCTGGCGATTAGTGGCGGGAGTGTTGGAATGGCTGCGAGTCATGAGGCTGAGATTCATGGTTTGATTCATAGAACTGAAAGTGTTGTTGGTGACATGGAACCGGTTACTGGTGTGACTGAGAATCAGGGTCAAACGGGTGAGTTTGTTCCGGAAGAAATGCAACAAGAATATTCTGGAAGGGGAGATAGTGGGTCAAAGGTTGTTGGGTCGGTTAAAGGTGAATCGGTTGAGAGTGGTGAGAAGACCAGTGATTTGAATCTTTTGCCTCATGAGCAAAACTCACACCCGTCTCTTTCGTGCAATGCGGTTGTGTATTCGGGCCTTGAATTGTCAAAAGATGAAGTTATGCAGGCCCTTAAGTCGTCTCCTAATGAAGAATGTGGGTACCCGAGTTACCCACCTGCAACCGAATTAGGGCCGCCAAATGGAGAAAGCAAATATGAAGAACCTCTGGGGTCGTTGAACATAATAATGGTGCTAGTTCAAGTTCCAGTTCTAGTGCATTAG 2394 48.66 MREEGISSSGDPLLFPNSPPPTAAASSAGASSPAVATNAGSADWLGHGQGSKAGSLSRISSQPVWISLSTSAGGSALGSSKPSCRPWERGDLLRRLSTFSPANWFGKPKAASSLSCARRGWVNVDVDKIQCESCRENLKYNGQDSWARTEGENDEEFANLLDEGHNATCPWRGNSCAESLVQFPPTPPSALIGGYKDRCDGLIQFPYLPVVANSAIDQMKLSRSLEIDRFLVQSTVYPGDVMSDSEISIYLRAQKLISLCGWEPRWLPNVQDCEEHSAQSARNGGSFSPKKDQDPFQGPSKKRVTNSTKKGSRVKSKFDSGSLLLDCSLCGATVRILDFVRVNLPARLAPNNIDVPDTSKNMAVTRGASAASAISGWVAADGAEDEQTEDVGEAAVSNVRMDLNLTMGSGLSTGHGTKRPISELYQDGNLGRDLVIGQPAGSEVGDRAASYESRGPTFKRNIDEGGSTVDRPHELIRQADSVEGVVIDRDGDEINDSKTSTGPSKRACESSSGAGPSQTLYFDIGQPGPSSQGYEHAAHASSVIAMDTICHSEDNDSMESVENHPGFNDEVNYPSTSAVNHDLNETYDMNHSTQGQQSTSVWVNSEIGVSSTNYEEVVNTDAARREGPSLAISGGSVGMAASHEAEIHGLIHRTESVVGDMEPVTGVTENQGQTGEFVPEEMQQEYSGRGDSGSKVVGSVKGESVESGEKTSDLNLLPHEQNSHPSLSCNAVVYSGLELSKDEVMQALKSSPNEECGYPSYPPATELGPPNGESKYEEPLGSLNIIMVLVQVPVLVH 797
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03428 797 MobiDBLite consensus disorder prediction 1 53 - -
Bial4g03428 797 MobiDBLite consensus disorder prediction 750 773 - -
Bial4g03428 797 MobiDBLite consensus disorder prediction 278 315 - -
Bial4g03428 797 MobiDBLite consensus disorder prediction 684 711 - -
Bial4g03428 797 MobiDBLite consensus disorder prediction 20 38 - -
Bial4g03428 797 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 720 - GO:0005634(PANTHER)
Bial4g03428 797 MobiDBLite consensus disorder prediction 489 534 - -
Bial4g03428 797 MobiDBLite consensus disorder prediction 497 526 - -
Bial4g03428 797 MobiDBLite consensus disorder prediction 439 469 - -
Bial4g03428 797 Pfam C3HC zinc finger-like 86 206 IPR012935 GO:0008270(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03428 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
26359 Bial15g01629 Bial4g03428
32685 Bial3g01694 Bial4g03428
189360 Bial4g03428 Bial16g02823
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr15:59441275 Bial4g03428 Bial-Chr4:78074328 wgd
Bial Bial-Chr16:72356167 Bial4g03428 Bial-Chr4:78074328 wgd
Bial Bial-Chr3:58998376 Bial4g03428 Bial-Chr4:78074328 wgd