AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03460 ATGCACAAAACGGCTCAAGCGTGGTTCACCGGCGGTCCGAGCCAGAAGAACAACGATCTATCTCAACCGCCTTCACTTCTCGCCGACTGGAACGCTTACGCCGCATCTTCACAAGATCTAGACTCCTCCGGTCTCGGTTTCGATATCGAATCCGCTGTACGGACAGCTAACGATAAGGTCTCCGGCACGTTTAATGTAGTTTCAAAGGGAGTGAGGGACATACCTGGAAACTTTCAATCTGCAACAAGCAATGTGCCAACTGGAAAATCTCTTGTGACATTTGGAATGCTTCTTGCTGTTGGTGTGTTTCTCGTGTTCATTGCTGTCACTATGTTCCTACCAGTCATGGTGATTGTGCCTCAGAAGTTTGCTATATGTTTCACTATTGGCTGCGCCCTTATTATTGCTTCGTTTTTTGCTCTCAAAGGATATAGAACTCAGTTTGCACATATGACATCTAAAGAGAGACTTCCTATTACATTGGGCTTTATTGGCAGCATGGTGGGCACCATTTATGTTTCAATGGTGCTTCACAGTTATCTTCTTTCTGTATTCTTTTCTATGTTACAGGTCATCTCATTGTCATACTACGCAATTTCCTACTTTCCCGGAGGATCGGCTGGCGTGAAATTCTTCACCTCTGCTATCACTTCTTCGATTTTGAGATGCTTCGGGAGGTGA 681 45.08 MHKTAQAWFTGGPSQKNNDLSQPPSLLADWNAYAASSQDLDSSGLGFDIESAVRTANDKVSGTFNVVSKGVRDIPGNFQSATSNVPTGKSLVTFGMLLAVGVFLVFIAVTMFLPVMVIVPQKFAICFTIGCALIIASFFALKGYRTQFAHMTSKERLPITLGFIGSMVGTIYVSMVLHSYLLSVFFSMLQVISLSYYAISYFPGGSAGVKFFTSAITSSILRCFGR 226
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03460 226 MobiDBLite consensus disorder prediction 1 21 - -
Bial4g03460 226 PANTHER UNCHARACTERIZED 1 217 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
Bial4g03460 226 Pfam Got1-Sft2-like family 91 203 IPR007305 GO:0016192(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03460 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189375 Bial4g03460 Bial16g02865
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr3:80408158 Bial4g03460 Bial-Chr4:78928459 dispersed
Bial Bial-Chr16:73106767 Bial4g03460 Bial-Chr4:78928459 wgd