AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03467 ATGAGTGGAGCTAGGGTTTCAATACCGAGCAATGTACGGAAGACGATCCAGAACATAAAGGAGATCACAGGTAATAATCACACTGAAGATGACATTTACGCAATGCTTAAGGACTGTTCCATGGATCCTAACGAGACTGCTCAGAAGCTGTTACTGCAAGATCCATTTCATGAGGTTAAGAGGAAGCGTGAGCGCAAGAAAGAGACTCTGAATAAAGAACCTACAGAGCCCAAATGGAGACCTGGGATGCAGGGTAGGGGAAATAGGGGCGGCAGGTTGAACTACCCATCTCGTCGCGCTTCTAATGATGGCAGGGCATCGCATTCTGCAAAGGAAAATGGAATGAGTAGAGGTGCAGATAATGGCCCAAAACAGTCAACTCATCAGGGTCAAAAGAATAAAGAGGCGGCTGTTAAAAGTTTTTCTCGTCCTGTACCTGATGAAAACAAATCTGAAGTGATTCCTGTTGTTGAGGCAAGTAAGGGCCCTGCTGTTGGCGGGAGTGTACGTGGGCCTCTCAATGACACAACAGCTTCTAAGACACCATCACCCTTAGAAGGGTTATATTTGTCTGCTAAAGATCCTATTTTGATTCCTTCACAAGAATCACGGCTCCCCGTGGGTACAATCAAACGTGAGGTTGGGAGTCAACAAACTTCGGTTGACCAAATTCATGAGACCCCCCTTGAGATTGAATCAATTGCATCTAGTTCCGAGGTTGGAAACTCTTCCATGCAAGCCAAGGCTTCGTCATCTCATTTCCCATTTACCGTGTCTCGGCCTTCTTCAAATTATAATAATAGACCACAACAAGCAATTGGTCCTCAGAAAGTCGGTCCAAGTATGGAATGGAAACCAAAACCAGCAAATCCAGTTCTTGCTCATGGAGCCGTGCCATCCGAGTCACCTAAGATGCCTGAGGTTCAAGTTGAAAGTCAAACTCCAAACTCGTTTGCAGCCCGTGATTTTGATTTAAAGGAAGCGACCCAAGAGCTCGAGAAGAAGCTAGAGGAATCACACATTTCAGATAATCAACATGTTATTATTCCGAATCACCTTCATGTTCCCGAAGCTGAAAAACTCGGGTTCTACTTTGGAAGCTTTGATGCCAGTTTCAGTCTTAATCCAATCTCCTCAAATGGGCCTGGGCTTGAGCCCGAGCCCGTGAGTGACAAAAGTTCTGAGGCTTCTGAGGTGGTTGATGAAAGTATAGACGAGCAGCTCAGAAATCAAAATGATGCTTTGGCAAGTGTGGAAGTTGAAGATCATCCTGACCGTCCATCATCATCCAATAACATACCCGAGAATCTATCAACCGAAGGTGACATGTCATCAATTCCGGGCCCCGATCAGCATGAAACCAAACAAGAGACATCACTCCCAACATCAAATCATCAATACCCGATTCTTCAGACATCTCCCAACTTTAGTTTTGGCTTCATTCCACCAATGATTGGGACCCACGTCACATCTTTTGAACCCAACGAGTCTCATAACCATGATGGTTCTCAAGTCCCAAACTTTGTTGTTCAGCAACCGTTTGACCCAGCAAGCTATTATGCTCAGTTTTATCGTTCAGGTGCTGACGTGGATGGTCGCGTATCACCTTTTCATTCACCAGGGGTTCCAACTAAGTTTAATGCAAATGTTCCTGTGCTATCTCCACAGGCTTCTCAAGAGGTTGGGAACTCACTAATGTTATCTGGTGCTGGTCCAACACCAACCGCCACCACACAAACTGGCGGATTCATGCAAACCTCCATACCCGTGACCCAACAACCACTACCTGTTTTCAGACAACCACCAGGGGTTCATTTACCCCACTACCCTCCAAATTACATCCCATACGCCCCATATTTCTCCCCATTTTATGTACCTCCACCAGCCATTCACCAATTTTTAAGCAGCAACACATTCCCTCAACAACCTCAACCCGGTAGCATGTACCCAGGCCCACCAGTACCTAGCCCTAAATACCCACTTCCACAATACAAAACGGGTGGTAATACTGGAAACCAGGTTAATATTGGTATGCCCGGAAGCTATGGAACGTACGGTTTAAACCCTGCTGGGTATAATTCTGGTTCAGCTGCTACAGCTGGCAATTCAACCTCCGATGAAGATCTCGGTGGGAACCAGTTTAAGGAAAGTAATGTCTACATTACCGGACAGCAGAGTGAAGGTTCGGGTGTATGGATGGCTGCACCGGGCCGAGACATGTCTGGTGTGCAGGCTAATTCATTCTATAATATTCCTCAAGGCGGTCACGGGACCTTTGCTAGTATTTACCACCACCCGGCTCAACCAGTAACCACCAGCGCGGTTCACCCACTTCTCCAACAGTCCCAAACACTGGCTGGACCGGGCGTTGACATGACGGGACCCACATCTCAAATCAACTGGCCTAATAACTACTAA 2418 46.65 MSGARVSIPSNVRKTIQNIKEITGNNHTEDDIYAMLKDCSMDPNETAQKLLLQDPFHEVKRKRERKKETLNKEPTEPKWRPGMQGRGNRGGRLNYPSRRASNDGRASHSAKENGMSRGADNGPKQSTHQGQKNKEAAVKSFSRPVPDENKSEVIPVVEASKGPAVGGSVRGPLNDTTASKTPSPLEGLYLSAKDPILIPSQESRLPVGTIKREVGSQQTSVDQIHETPLEIESIASSSEVGNSSMQAKASSSHFPFTVSRPSSNYNNRPQQAIGPQKVGPSMEWKPKPANPVLAHGAVPSESPKMPEVQVESQTPNSFAARDFDLKEATQELEKKLEESHISDNQHVIIPNHLHVPEAEKLGFYFGSFDASFSLNPISSNGPGLEPEPVSDKSSEASEVVDESIDEQLRNQNDALASVEVEDHPDRPSSSNNIPENLSTEGDMSSIPGPDQHETKQETSLPTSNHQYPILQTSPNFSFGFIPPMIGTHVTSFEPNESHNHDGSQVPNFVVQQPFDPASYYAQFYRSGADVDGRVSPFHSPGVPTKFNANVPVLSPQASQEVGNSLMLSGAGPTPTATTQTGGFMQTSIPVTQQPLPVFRQPPGVHLPHYPPNYIPYAPYFSPFYVPPPAIHQFLSSNTFPQQPQPGSMYPGPPVPSPKYPLPQYKTGGNTGNQVNIGMPGSYGTYGLNPAGYNSGSAATAGNSTSDEDLGGNQFKESNVYITGQQSEGSGVWMAAPGRDMSGVQANSFYNIPQGGHGTFASIYHHPAQPVTTSAVHPLLQQSQTLAGPGVDMTGPTSQINWPNNY 805
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03467 805 MobiDBLite consensus disorder prediction 429 466 - -
Bial4g03467 805 PANTHER FLOCCULATION PROTEIN (DUF1296) 1 805 IPR044277 GO:0051082(PANTHER)
Bial4g03467 805 MobiDBLite consensus disorder prediction 119 136 - -
Bial4g03467 805 MobiDBLite consensus disorder prediction 785 805 - -
Bial4g03467 805 MobiDBLite consensus disorder prediction 379 404 - -
Bial4g03467 805 MobiDBLite consensus disorder prediction 418 466 - -
Bial4g03467 805 MobiDBLite consensus disorder prediction 54 75 - -
Bial4g03467 805 MobiDBLite consensus disorder prediction 52 184 - -
Bial4g03467 805 Pfam GBF-interacting protein 1 N-terminal 8 68 IPR009719 -
Bial4g03467 805 SUPERFAMILY UBA-like 8 70 IPR009060 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03467 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
26350 Bial15g01607 Bial4g03467
32680 Bial3g01673 Bial4g03467
189380 Bial4g03467 Bial16g02870
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr23:68727258 Bial4g03467 Bial-Chr4:78999557 dispersed
Bial Bial-Chr24:48397618 Bial4g03467 Bial-Chr4:78999557 dispersed
Bial Bial-Chr4:7188461 Bial4g03467 Bial-Chr4:78999557 dispersed
Bial Bial-Chr4:78999557 Bial6g02112 Bial-Chr6:59228463 dispersed
Bial Bial-Chr15:73677821 Bial4g03467 Bial-Chr4:78999557 transposed
Bial Bial-Chr15:59095471 Bial4g03467 Bial-Chr4:78999557 wgd
Bial Bial-Chr16:73153938 Bial4g03467 Bial-Chr4:78999557 wgd
Bial Bial-Chr3:58733311 Bial4g03467 Bial-Chr4:78999557 wgd