Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial4g03472 | ATGGTGGAAGCTTCCAGAATCTTCCACACCACACTCCTTCCTTCACTCCAAACCTCACCTCTCAAACACAAACACCGTACACTCTCTGTACGAAGAACCTCAATCCTTCGCTGCACGATTTCAACTAGCAGTGACACGTCTAAGGCGCCCGTGGCACCGCAGGCGATACCGTGGGGGTGCGAGATCGATTCGGTGGAGAACGCGGCCGCTTTGCAGAAGTGGTTGACCGAGTCCGGGTTACCGGATCAGAAAATGGATATACAGAAGGTTGATGTGGGGGAAAGAGGTTTGGTGGCCAATAATAATATTAGGAAGGGGGAGAAGCTGCTGTTTGTGCCTCCATCACTCGTTATTTCCGCCGATTCGGAGTGGAGTTTTCCAGATGCTGGTGAGGTTTTGAAGAGATATAATGTGCCAGATTGGCCATTAATTGCAACATACCTAATTAGTGAAGCAAGTCTTATGAAATCATCAAGATGGAGCAATTATATATCAGCCTTACCAAGACAACCTTACTCACTTTTATACTGGACGCGTGCAGAATTAGATCGGTACTTGGAAGCATCCCAGATTAGAGAACGTGCAATTGAAAGGATCAATAATGTAACCGGAACATACAATGATTTGAGAGCAAGAATTTTCTCCAAGCATCCTAATTTATTTCCTGAAGAGGTATTCAATATGGAAACATTTAGATGGTCTTTTGGGATTCTTTTTTCGCGTTTGGTTCGATTACCCTCGTTGGATGGAAGAGTTGCATTAGTCCCGTGGGCAGATATGCTTAATCATAGTTGTGATGTGGAAACTTTTTTGGATTATGATAAATCAACAAAGGGAGTTGTATTTACAACCGATCGCGCTTACCAGCCAGGTGAGCAGGTGTTTATTTCATATGGCAGGAAATCTAATGGAGAACTCTTGCTTTCTTACGGGTTTGTGCCAAGGCAAGGTACAAACCCGCGTGACTCGGTTGAGTTGCCATTGATGCTTAAAAAATCAGATAAGTGCTATGAACAAAAGGTGGAAGCTTTGAAGAAGCATGGGCTGTCAGCATCACAATGTTTTCCCTTACAAGTTACGGGTTGGCCGTTGGAGCTAATAGCATATGCATATTTAGCAGTCAGTCCCCCTAGTATGAGTGCAAAGTTTGAAGAGATGGCATCTGCAGCATCGAATAAAAACACCAGCAATAAGGAAATTAAATATCCTGAATTAGAGGAAGAGGCATTGCAATACATATTGGATAGCTGTGAATCCAGCATATCAAAATATACCAAGTTCCTTCAGGCAAGCGGATCAATGGATTTGGATATAACATCTCCAAAGCAGTTGAACCGTAAAGTCTTCCTCAAGCAGTTAGCCGTTGACTTGTGCAATAGCGAACAACGAATTCTCTTTCGTGCCCAATATATTTTGCGAAGAAAGTTAAGGGATATGAGGAGAGGTGAACTCAAGGCCCTTAAATTGTTTGATAGTGTCACAAAGTTTTTTAAATAA | 1497 | 42.82 | MVEASRIFHTTLLPSLQTSPLKHKHRTLSVRRTSILRCTISTSSDTSKAPVAPQAIPWGCEIDSVENAAALQKWLTESGLPDQKMDIQKVDVGERGLVANNNIRKGEKLLFVPPSLVISADSEWSFPDAGEVLKRYNVPDWPLIATYLISEASLMKSSRWSNYISALPRQPYSLLYWTRAELDRYLEASQIRERAIERINNVTGTYNDLRARIFSKHPNLFPEEVFNMETFRWSFGILFSRLVRLPSLDGRVALVPWADMLNHSCDVETFLDYDKSTKGVVFTTDRAYQPGEQVFISYGRKSNGELLLSYGFVPRQGTNPRDSVELPLMLKKSDKCYEQKVEALKKHGLSASQCFPLQVTGWPLELIAYAYLAVSPPSMSAKFEEMASAASNKNTSNKEIKYPELEEEALQYILDSCESSISKYTKFLQASGSMDLDITSPKQLNRKVFLKQLAVDLCNSEQRILFRAQYILRRKLRDMRRGELKALKLFDSVTKFFK | 498 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial4g03472 | 498 | PANTHER | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE | 68 | 473 | IPR050600 | GO:0016279(PANTHER)|GO:0018026(PANTHER) | |
| Bial4g03472 | 498 | Gene3D | - | 317 | 487 | IPR036464 | - | |
| Bial4g03472 | 498 | SMART | set-7 | 83 | 305 | IPR001214 | GO:0005515(InterPro) | |
| Bial4g03472 | 498 | PIRSF | RMT-SET | 4 | 495 | IPR011192 | GO:0009507(InterPro)|GO:0030785(InterPro) | |
| Bial4g03472 | 498 | Gene3D | set domain protein methyltransferase, domain 1 | 38 | 312 | - | - | |
| Bial4g03472 | 498 | Pfam | SET domain | 95 | 299 | IPR001214 | GO:0005515(InterPro) | |
| Bial4g03472 | 498 | SUPERFAMILY | RuBisCo LSMT C-terminal, substrate-binding domain | 329 | 497 | IPR036464 | - | |
| Bial4g03472 | 498 | FunFam | Ribulose-1,5 bisphosphate carboxylase-oxygenase large subunit N-methyltransferase, chloroplastic | 52 | 312 | - | - | |
| Bial4g03472 | 498 | Pfam | Rubisco LSMT substrate-binding | 332 | 465 | IPR015353 | - | |
| Bial4g03472 | 498 | FunFam | Rubisco methyltransferase family protein | 318 | 481 | - | - | |
| Bial4g03472 | 498 | ProSiteProfiles | SET domain profile. | 83 | 299 | IPR001214 | GO:0005515(InterPro) | |
| Bial4g03472 | 498 | SUPERFAMILY | SET domain | 67 | 315 | IPR046341 | - | |
| Bial4g03472 | 498 | Coils | Coil | 192 | 212 | - | - | |
| Bial4g03472 | 498 | CDD | SET-RBCMT | 83 | 313 | IPR044431 | GO:0016279(InterPro)|GO:0018022(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial4g03472 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 189383 | Bial4g03472 | Bial16g02874 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr19:45103836 | Bial4g03472 | Bial-Chr4:79047915 | dispersed | |
| Bial | Bial-Chr4:79047915 | Bial7g02016 | Bial-Chr7:54293398 | dispersed | |
| Bial | Bial-Chr16:73189631 | Bial4g03472 | Bial-Chr4:79047915 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Bial | SET | 1e-15 | No_clan | TR | SET |