Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial4g03496 | ATGTTCCATCACACCCCACTTACTACTCAAACTCAAACCATGGCTCTGACACCAACCACTGACCGTGATCAAATTCAAATCACCAACACTGTTCGTCCGTCTGGTGAAATCCATGTCATTGTGGGCCCCATGTTTGCAGGCAAAACCACTGCTTTGCTTCGTAGGATCAAATCTGAAGCCTCCAATGGCAGGAACATAGCCATGATAAAATCAAGCAAAGATAACCGATACGCAATCGATTCGGTTGTGACCCATGATGGAACAAAGCATCCATGTTGGGCACTGGCTGATCTGATGTCTTTTAAGCAGAATCTTGGAGAAGAGGCATATGAAAAGGTTGATGTAATTGGGATTGATGAGGCACAATTCTTTGATGATCTTTATGACTTTTGTTGTAAAGCTGCTGACCATGATGGCAAGACTGTAATTGTTGCTGGTCTTGATGGTGATTACTTAAGAAGGAACTTTGGTCCTGTGCTTGATATAGTACCACTTGCTGATACAATTACTAAACTAACCGCTCGATGTGAGTTATGTGGCAAACGGGCCCATTTCACGTTTAGGAAGACAAGCGAGACGAAAACCGAACTTATTGGTGGGGCGGATATGTACATGCCTGTTTGTCGTCAACATTATGTTAACGGGCATGTGGTGAAGAAACCGGCTGCTTGA | 672 | 43.9 | MFHHTPLTTQTQTMALTPTTDRDQIQITNTVRPSGEIHVIVGPMFAGKTTALLRRIKSEASNGRNIAMIKSSKDNRYAIDSVVTHDGTKHPCWALADLMSFKQNLGEEAYEKVDVIGIDEAQFFDDLYDFCCKAADHDGKTVIVAGLDGDYLRRNFGPVLDIVPLADTITKLTARCELCGKRAHFTFRKTSETKTELIGGADMYMPVCRQHYVNGHVVKKPAA | 223 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial4g03496 | 223 | FunFam | Thymidine kinase | 173 | 215 | - | - | |
| Bial4g03496 | 223 | ProSitePatterns | Thymidine kinase cellular-type signature. | 199 | 212 | IPR020633 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Bial4g03496 | 223 | Gene3D | - | 173 | 214 | - | - | |
| Bial4g03496 | 223 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 173 | 215 | - | - | |
| Bial4g03496 | 223 | Pfam | Thymidine kinase | 35 | 212 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Bial4g03496 | 223 | FunFam | Thymidine kinase | 31 | 172 | - | - | |
| Bial4g03496 | 223 | PANTHER | THYMIDINE KINASE | 31 | 220 | IPR001267 | GO:0004797(InterPro)|GO:0004797(PANTHER)|GO:0005524(InterPro)|GO:0046104(PANTHER) | |
| Bial4g03496 | 223 | PIRSF | Tdk | 32 | 222 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Bial4g03496 | 223 | Gene3D | - | 28 | 172 | IPR027417 | - | |
| Bial4g03496 | 223 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 35 | 173 | IPR027417 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial4g03496 | K00857 | thymidine kinase [EC:2.7.1.21] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 189401 | Bial4g03496 | Bial16g02897 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr16:73498844 | Bial4g03496 | Bial-Chr4:79357245 | wgd |