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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03497 ATGGCTATAATTATAACTTATACCGTTATTCTAATTTCATATTTACTTTCATCTCATTTTGATATATCATATGCTTTAGGATGTTCAGATCATAGATTAGCATCTAAAGGAGTCTACACTTTTTGCAAAGATCTTCCACATTTATCATCCCAACTTTATTGGGCCTACAACTCAACCATGGGTGTGGCCCAAATCGCATACCAGGCCCGACAAGGAGCCGGAGGTTGGGTTGCGTGGGCCATCAACCCGAACCAAATAGGTATGGTTGGGTCGCAAGCATTGGTGGCATTTGTGAACAATAATGGAAGTGTGACGGTGTATCCAACAATGATAACTAGTTACAGCCCGTCAATGGAGCCCGCGGATCTTAGCTTTCAGGTTTCAGACCTTTCGGCTGAGTTTTTAAACAATGAGATTACCATTTATGCGACGGTGGGCCCCTTTGCAGGCGGGTCCGTTGTTAATCAAGTATGGCAAGCGGGGGATTTGGTTTTGAATGGTGTTCCTCAAATGCATGAAGTTACTCAACCAAATCTTCAATCGACTGGGGAGCTTGATTTCTTGTCGGGTTAA 573 43.28 MAIIITYTVILISYLLSSHFDISYALGCSDHRLASKGVYTFCKDLPHLSSQLYWAYNSTMGVAQIAYQARQGAGGWVAWAINPNQIGMVGSQALVAFVNNNGSVTVYPTMITSYSPSMEPADLSFQVSDLSAEFLNNEITIYATVGPFAGGSVVNQVWQAGDLVLNGVPQMHEVTQPNLQSTGELDFLSG 190
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03497 190 Pfam Protein of unknown function (DUF568) 88 187 IPR045265 -
Bial4g03497 190 ProSiteProfiles DOMON domain profile. 48 161 IPR005018 -
Bial4g03497 190 CDD DOMON-CIL1-like 39 189 IPR045265 -
Bial4g03497 190 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 2 189 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03497 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189402 Bial4g03497 Bial16g02898
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr4:79362868 Bial4g03498 Bial-Chr4:79365811 tandem
Bial Bial-Chr16:73504467 Bial4g03497 Bial-Chr4:79362868 wgd
Bial Bial-Chr24:53419655 Bial4g03497 Bial-Chr4:79362868 wgd
Bial Bial-Chr3:57789127 Bial4g03497 Bial-Chr4:79362868 wgd