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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03517 ATGGGTATCACCGGAGAACTCGTGCGAAACGCATTCTCAAAACATCGATCGTTCGGAACCAACCATGATACCAATGTAATGAGAAACAACCATGCAGAAAGAAAGAGATGGGCTTCAGTTAGATCATATCTTTGTGGTGATGAGTTTAGTTCGGTGTTGGCCGAGGAAGATTTAGGTTCTAGAAGAACCTCAAAGTCAGTTGTTCTAGAAGATTATTCTTGTTCTACTCGAACATCAAAAGCTACTGTTTTTAGCTCAAGAATTGATGATGAGTTAACGTCTGTCAAAGGTGGTTCCGAGACCACTGTCACACAACCTATTTCTGATCAAAACTTCAATGTGACTGGTGATGATGATAGTGAAAAGACCAAATTACCCTCAGAAAATGAAGCTGCACTTGTTATTCAGTCAGCATTTAGGAGTTTTCTGGCTAGACGTGAAACTAAAAGAGTTGAAGATAAGGGTGATCAGGATCTTGAATCGGTCGCGACATCGGTGGAAGTATTAACCGGTGACTCGGTGGTGGAGGCTAATGTTGAAGATGGTAGTGAAAGTTGTACTCATCGTGTGAAACATCACAAGAGTGCAAGAGTACGAACATCAAAGTTAAAGCCAAAAGATTGGGATGATAGCACTTTGAGTAGCAACATATCAAAAATGAGGCTTCAACACAGACTAGAGGCTTCCACAAGGCGCGAAAGGGCACTCGCGTATGCTTTCTCACAACAGCTAAGGATATGCTCAAAGAAGAAGCAAAGTGTGAGACCGGGGAACGAAACAGAAGCAAACATGAGTTGGAGTTGGCTCGAGCGATGGATGGCCACCCGACAACATGATACTTCTTTTGGGGATATAAGCAAACAATATGAGCAATTAAATGGAAACCAAAAACTAATGGTAAAAAGTAGAGTAATATCGGATTTAGCAGGTGAAGAGAAGGAAAGTTGCGGATCAAATGAAGTTTCGGTGCATTTCGACAATGTTTCTTTGGGCTCAAAAGCCGCTGAAAAACCTTATCGTAAGCCTGTTGGGAATCGAGTCAAGACTACAAGTGTCGCAAGGCGAAAAAGGTCAACACGTTATGGGTTCAATAACCAGTATAGCAAGGTGAACAAGCAAGGAGAAAAAGAAATTAAATGTGAAGACCAACAATAA 1155 41.56 MGITGELVRNAFSKHRSFGTNHDTNVMRNNHAERKRWASVRSYLCGDEFSSVLAEEDLGSRRTSKSVVLEDYSCSTRTSKATVFSSRIDDELTSVKGGSETTVTQPISDQNFNVTGDDDSEKTKLPSENEAALVIQSAFRSFLARRETKRVEDKGDQDLESVATSVEVLTGDSVVEANVEDGSESCTHRVKHHKSARVRTSKLKPKDWDDSTLSSNISKMRLQHRLEASTRRERALAYAFSQQLRICSKKKQSVRPGNETEANMSWSWLERWMATRQHDTSFGDISKQYEQLNGNQKLMVKSRVISDLAGEEKESCGSNEVSVHFDNVSLGSKAAEKPYRKPVGNRVKTTSVARRKRSTRYGFNNQYSKVNKQGEKEIKCEDQQ 384
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03517 384 MobiDBLite consensus disorder prediction 98 114 - -
Bial4g03517 384 MobiDBLite consensus disorder prediction 335 368 - -
Bial4g03517 384 ProSiteProfiles IQ motif profile. 128 157 - -
Bial4g03517 384 PANTHER IQ-DOMAIN 5-RELATED 195 322 - -
Bial4g03517 384 MobiDBLite consensus disorder prediction 98 124 - -
Bial4g03517 384 Pfam IQ calmodulin-binding motif 130 148 IPR000048 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03517 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189407 Bial4g03517 Bial16g02919
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr4:79828326 Bial6g01051 Bial-Chr6:17023727 dispersed
Bial Bial-Chr16:73973500 Bial4g03517 Bial-Chr4:79828326 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bial10g03820 BST 1 388 IQD Protein family AT3G22190 54.229 8.66e-113 334.0
Bial18g02049 . 94 234 IQD Protein family AT3G52290 46.809 5.27e-34 121.0
Bial3g00437 ACH 1 368 IQD Protein family AT4G14750 41.775 3.15e-67 214.0
Bial2g00094 . 106 332 IQD Protein family AT3G16490 42.194 2.32e-38 139.0
Bial18g03139 . 35 243 IQD Protein family AT5G03040 47.393 3.17e-50 167.0
Bial18g03019 BST,WGDA 11 534 IQD Protein family AT4G00820 43.934 4.54e-110 335.0
Bial2g02299 BST 1 397 IQD Protein family AT2G26180 57.279 3.30e-129 377.0
Bial4g02033 ACH 1 374 IQD Protein family AT4G14750 48.232 8.86e-94 284.0
Bial3g03682 . 130 172 IQD Protein family AT5G03040 62.791 2.68e-09 53.9
Bial3g03373 ACH 46 353 IQD Protein family AT3G16490 56.936 9.86e-83 254.0
Bial3g03212 ACH 60 257 IQD Protein family AT3G15050 49.02 2.14e-64 199.0
Bial18g01112 . 1 216 IQD Protein family AT3G15050 46.725 4.17e-59 187.0
Bial9g00082 . 11 534 IQD Protein family AT4G00820 41.121 4.75e-98 302.0
Bial3g02203 ACH,BST,WGDA 1 480 IQD Protein family AT4G23060 38.571 2.24e-57 193.0
Bial8g01034 BST 113 409 IQD Protein family AT3G52290 36.42 9.80e-46 162.0
Bial8g00798 BST,WGDA 456 794 IQD Protein family AT1G19870 37.037 2.97e-41 160.0
Bial22g00322 . 1 401 IQD Protein family AT5G03040 44.068 6.85e-86 269.0
Bial6g00227 . 1 256 IQD Protein family AT5G03040 50.579 2.09e-70 221.0
Bial6g00421 BST,WGDA 1 442 IQD Protein family AT5G13460 42.857 7.42e-96 291.0
Bial12g02237 BST,WGDA 1 281 IQD Protein family AT5G03040 39.31 4.66e-41 151.0
Bial12g02940 BST,WGDA 1 237 IQD Protein family AT3G15050 47.917 2.20e-68 210.0
Bial12g03015 . 49 517 IQD Protein family AT3G59690 46.575 1.43e-129 385.0
Bial23g00019 . 11 199 IQD Protein family AT4G00820 39.698 1.72e-30 118.0
Bial13g01920 BST,WGDA 155 262 IQD Protein family AT4G23060 53.704 4.60e-26 103.0
Bial13g00448 BST,WGDA 418 788 IQD Protein family AT1G19870 31.235 4.26e-27 115.0
Bial4g01797 . 108 240 IQD Protein family AT5G03040 54.074 2.80e-41 145.0
Bial4g03312 ACH,BST 39 240 IQD Protein family AT3G15050 54.327 6.43e-75 227.0
Bial4g03517 BST 1 362 IQD Protein family AT5G35670 41.711 7.12e-67 216.0
Bial4g00465 BST 11 534 IQD Protein family AT4G00820 50.835 3.76e-145 424.0
Bial13g00790 . 108 333 IQD Protein family AT5G07240 40.684 8.37e-38 138.0
Bial13g00826 . 55 516 IQD Protein family AT3G59690 37.352 5.03e-79 252.0
Bial6g03171 BST,WGDA 197 794 IQD Protein family AT1G19870 35.714 2.67e-87 288.0
Bial12g01881 ACH,BST,WGDA 90 353 IQD Protein family AT3G16490 44.59 5.40e-66 210.0
Bial23g01512 . 1 272 IQD Protein family AT1G14380 41.83 3.88e-49 175.0
Bial15g00424 BST 1 373 IQD Protein family AT4G14750 41.192 2.12e-64 215.0
Bial1g01114 WGDA 1 458 IQD Protein family AT5G03040 43.312 2.78e-92 288.0
Bial1g00368 BST,WGDA 1 346 IQD Protein family AT1G19870 37.752 8.61e-48 179.0
Bial6g02580 . 1 280 IQD Protein family AT3G22190 59.441 2.07e-89 284.0
Bial6g02586 BST,WGDA 180 377 IQD Protein family AT3G22190 48.485 9.56e-56 180.0
Bial1g00512 ACH,WGDA 107 379 IQD Protein family AT5G03040 50.719 2.11e-76 243.0
Bial13g00596 . 1 379 IQD Protein family AT5G03040 43.317 3.53e-84 264.0
Bial23g00108 . 82 331 IQD Protein family AT5G07240 43.011 1.50e-45 158.0
Bial13g01281 BST,WGDA 1 449 IQD Protein family AT5G03040 43.683 1.55e-95 296.0
Bial24g02094 BST,WGDA 163 324 IQD Protein family AT2G26410 41.104 2.95e-29 112.0
Bial24g02774 BST,WGDA 1 237 IQD Protein family AT3G15050 46.667 1.00e-65 204.0
Bial22g01945 BST 183 517 IQD Protein family AT3G59690 51.639 1.30e-109 328.0
Bial22g03397 BST 1 388 IQD Protein family AT3G22190 54.478 9.03e-112 331.0
Bial2g02884 . 108 240 IQD Protein family AT5G03040 54.074 2.80e-41 145.0
Bial2g02518 ACH 151 481 IQD Protein family AT4G23060 38.938 9.03e-48 167.0
Bial11g02579 . 73 572 IQD Protein family AT1G18840 34.449 5.87e-64 213.0
Bial9g02366 BST,WGDA 25 443 IQD Protein family AT5G13460 42.923 6.45e-85 263.0
Bial21g00753 ACH,BST,WGDA 1 353 IQD Protein family AT3G16490 46.524 1.76e-61 201.0
Bial21g00880 BST,WGDA 1 131 IQD Protein family AT5G03960 39.098 1.85e-07 48.5
Bial19g01629 ACH,BST,WGDA 1 575 IQD Protein family AT1G74690 39.116 4.60e-89 284.0
Bial19g02199 ACH 1 243 IQD Protein family AT5G03040 48.235 1.53e-65 209.0
Bial19g02200 . 237 415 IQD Protein family AT3G52290 44.388 2.14e-29 110.0
Bial10g02351 BST 1 517 IQD Protein family AT3G59690 48.195 2.34e-146 428.0
Bial10g02070 BST 1 396 IQD Protein family AT3G49260 51.351 2.79e-99 303.0
Bial10g00686 . 1 444 IQD Protein family AT5G03040 43.791 5.44e-100 303.0
Bial24g03183 BST,WGDA 352 444 IQD Protein family AT5G03040 52.688 7.45e-17 78.6
Bial24g03182 . 1 450 IQD Protein family AT5G03040 49.889 2.08e-122 370.0
Bial5g02847 BST,WGDA 11 534 IQD Protein family AT4G00820 42.804 1.36e-109 333.0
Bial7g01627 ACH,BST,WGDA 1 575 IQD Protein family AT1G74690 37.647 5.22e-87 279.0
Bial7g02207 . 1 450 IQD Protein family AT5G03040 44.444 9.32e-107 322.0
Bial14g01837 BST,WGDA 11 534 IQD Protein family AT4G00820 53.069 3.03e-158 459.0
Bial23g01143 . 3 307 IQD Protein family AT4G14750 33.234 1.52e-35 136.0
Bial23g01280 . 5 100 IQD Protein family AT3G51380 50.794 7.52e-30 102.0
Bial17g01756 BST 1 397 IQD Protein family AT2G26180 56.971 1.06e-127 373.0
Bial17g01955 ACH 152 481 IQD Protein family AT4G23060 37.5 6.28e-53 183.0
Bial17g02493 . 1 256 IQD Protein family AT5G03040 50.579 7.35e-69 220.0
Bial23g02343 . 157 572 IQD Protein family AT1G18840 30.189 1.57e-32 124.0
Bial24g01748 ACH,BST,WGDA 1 353 IQD Protein family AT3G16490 46.5 3.55e-81 252.0
Bial14g03152 . 85 171 IQD Protein family AT5G03040 55.172 5.76e-21 83.6
Bial21g02305 BST,WGDA 4 443 IQD Protein family AT5G13460 42.163 4.95e-86 266.0
Bial15g02445 ACH,BST 187 480 IQD Protein family AT4G23060 31.457 1.32e-23 99.4
Bial22g01612 BST 1 396 IQD Protein family AT3G49260 51.843 5.09e-100 305.0
Bial7g00338 WGDA 204 278 IQD Protein family AT1G19870 65.333 4.20e-28 108.0
Bial9g00771 ACH,BST,WGDA 1 353 IQD Protein family AT3G16490 46.4 1.69e-63 206.0
Bial9g00896 BST,WGDA 1 121 IQD Protein family AT5G03960 42.276 8.13e-09 50.4
Bial20g01410 . 7 333 IQD Protein family AT5G07240 42.742 4.64e-40 144.0
Bial18g00540 BST,WGDA 1 442 IQD Protein family AT5G13460 42.411 4.86e-95 290.0
Bial16g02919 BST 1 362 IQD Protein family AT5G35670 42.513 1.04e-67 219.0
Bial16g02681 ACH,BST 65 241 IQD Protein family AT3G15050 57.062 1.49e-68 212.0
Bial14g02911 BST,WGDA 197 794 IQD Protein family AT1G19870 36.452 2.34e-86 285.0
Bial14g02331 BST,WGDA 180 377 IQD Protein family AT3G22190 48.485 9.56e-56 180.0
Bial14g02325 . 1 236 IQD Protein family AT3G22190 57.851 7.77e-64 213.0
Bial16g00436 BST,WGDA 6 364 IQD Protein family AT1G01110 51.389 3.53e-97 289.0
Bial12g03344 BST,WGDA 204 243 IQD Protein family AT5G03040 75.0 9.55e-14 71.6
Bial12g03342 . 1 450 IQD Protein family AT5G03040 49.446 7.05e-127 372.0
Bial20g00554 BST,WGDA 1 346 IQD Protein family AT1G19870 39.489 4.41e-55 202.0
Bial20g00877 BST,WGDA 100 443 IQD Protein family AT5G03040 34.986 3.00e-46 164.0
Bial10g00240 ACH,BST,WGDA 1 576 IQD Protein family AT1G74690 37.393 1.34e-74 245.0
Bial19g00319 WGDA 204 278 IQD Protein family AT1G19870 65.333 1.25e-27 108.0
Bial23g02638 . 1 353 IQD Protein family AT3G16490 51.99 2.31e-95 289.0
Bial23g02701 . 1 414 IQD Protein family AT1G72670 41.099 1.67e-80 253.0
Bial11g00116 . 108 331 IQD Protein family AT5G07240 44.664 2.83e-45 157.0
Bial11g00020 . 2 145 IQD Protein family AT4G10640 39.355 1.33e-22 95.1
Bial10g00504 . 55 451 IQD Protein family AT5G03040 56.049 5.47e-131 387.0
Bial14g00085 ACH 106 332 IQD Protein family AT3G16490 42.194 2.32e-38 139.0
Bial11g01771 ACH,BST 1 272 IQD Protein family AT1G14380 41.83 3.88e-49 175.0
Bial11g01536 . 5 100 IQD Protein family AT3G51380 50.794 8.48e-30 102.0
Bial11g01404 . 3 307 IQD Protein family AT4G14750 33.333 3.85e-35 135.0
Bial6g01051 . 1 236 IQD Protein family AT3G15050 44.98 2.13e-58 186.0
Bial6g02069 BST,WGDA 11 534 IQD Protein family AT4G00820 53.297 9.79e-157 456.0
Bial6g02266 . 46 257 IQD Protein family AT3G52290 45.327 2.74e-34 126.0