AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03519 ATGCTCTCCTCCATGACAATTACAACCCCAATCTTCCACCAATTCACCCCACCAACCCCACAAACAATCACCCTCAAAAACCCCACAAAACCCCACGAATTTGCCGCCAAATCTTTGCCAAATTCAGGGTTTTTATCAGCAATTGGCAACGCAATAGAGGAGCAAGAGTACAGGAAAGCAAGGGCTGAGGTGGTGAGAAGAGGCATGGGGATTGAAGGGTATAATATTGAAGGTGTGTCTGTTGGTGGGCTTGAGACCTGTGTCATTGTTCCAGAGTTTAAGTGTGTGTTTGATATTGGAAAGTGTCCGCCTAGAGCTGTGGGGATGAGCTACTTGTTTCTTACTCATGCTCATCTTGATCACATTGGTGGGCTACCGATGTATATTGCAACTCGTGGCTTATACAACATGAGTCCTCCAACCGTATTTGTACCTCCTTCGATTAAAGACGACGTTGAAGAGTTGATTGAGCTTCATAGGAAGATGGGTGACGTGGAACTAAAAGTCGATTTGGTTGCATTGGATGTAGGAGAAACATATGAGCTAAGAAACGATCTTGTTGTACGCCCGTTTAAAACTTACCATGTTATACCGAGTCAGGGTTATGTGATTTACTCGGTTCGGAAGAAACTTAAGAAACAATATATTCACTTGAAAGGAAGGGAGATTGAGAAAAAGAAGAAATCTGGTGTTGAGATAACGGATATCATATTGTCACCGGAGGTGGCGTTCACAGGCGATACAAGCTCTGAATTTCTACTTGATCCACGAAGTTCGGATGCCTTGCGAGCCAAAGTTCTTATAACCGAGGCTACTTTTTTGGATGATAAATGCAGCATTGAGCATGCGCGAGAACATGGTCACATGCATATTGATGAGATTATCGAGCATTCTAAGTGGATTAGGAACAATGCGGTCCTTTTGACGCATTTCTCGTCACGCTACCACGTCGAGGAAATCCGACAAGCCGTTACAAGGTTGCAGGCAAAGGTTCAAGCCAAAGTGGTCCCACTTACAGAAGGTTTTAGATCAATGTACACACCATAA 1047 43.94 MLSSMTITTPIFHQFTPPTPQTITLKNPTKPHEFAAKSLPNSGFLSAIGNAIEEQEYRKARAEVVRRGMGIEGYNIEGVSVGGLETCVIVPEFKCVFDIGKCPPRAVGMSYLFLTHAHLDHIGGLPMYIATRGLYNMSPPTVFVPPSIKDDVEELIELHRKMGDVELKVDLVALDVGETYELRNDLVVRPFKTYHVIPSQGYVIYSVRKKLKKQYIHLKGREIEKKKKSGVEITDIILSPEVAFTGDTSSEFLLDPRSSDALRAKVLITEATFLDDKCSIEHAREHGHMHIDEIIEHSKWIRNNAVLLTHFSSRYHVEEIRQAVTRLQAKVQAKVVPLTEGFRSMYTP 348
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03519 348 PANTHER TRNASE Z TRZ1 35 342 - -
Bial4g03519 348 SUPERFAMILY Metallo-hydrolase-oxidoreductase 85 324 IPR036866 -
Bial4g03519 348 Gene3D - 74 343 IPR036866 -
Bial4g03519 348 Pfam Beta-lactamase superfamily domain 108 311 IPR001279 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03519 K00784 ribonuclease Z [EC:3.1.26.11]
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Event-related genes

Select Gene_1 Gene_2 Event_name
189409 Bial4g03519 Bial16g02921
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr23:64672841 Bial4g03519 Bial-Chr4:79846570 dispersed
Bial Bial-Chr16:73990431 Bial4g03519 Bial-Chr4:79846570 wgd