AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial4g03562 | ATGTACCGAATTAGTTGCTTAACACCAACACACACACGCATTGCATTGCATTGCATTGCATATTATTATTGCTTCTGTCACGCAGGTTACGCCTCATCTCTTTTCCGTTACGTATCACTCCATTGCTGCTTTAATGACGTAAGCAACCATTACTGGTATGATGATTCAGATAGTGGCCGAGGACTGATTTTGGTAACGCCGTTGAAGATGCGTAGTCTATTCAAAGCAAGGTTGCTCTTGTTGTCCATTTGGTTACTTCTCTCACCGACTGCATATTCAGATCCTAATGATGGATTGGTTAGAGTTGGACTTAAGAAGAGGAAAATCAACGAACTGAATCAAATCTGGCTCGCTGGATCAAACGAAGGGTACGCTAGAAGAAGCGATGGTGTTGAAGGTAATCTTAGGGGTTTAGGTGCTGATGCTATTGGTCTAAAAAATTACCTGGATGCTCAGTATTATGGTGAGATTGGTATCGGTACTCCACCTCAAAAGTTCACTGTGGTTTTTGACACCGGTAGTTCTAATCTTTGGGTGCCTTCTGCAAAATGCTACTTCTCAGTAGCTTGTCTTCTTCACCCAAAGTATAAGTCTAGCCAGTCAAGTTCTTATAAGAAAAATGGCAAATCTGCAGCAATTCATTATGGAACAGGCTCTATCTCTGGTTTTTTTAGCAAAGATTACATCAAACTAGGTGATCTTGTTGTAAAAGAACAAGATTTCATAGAGGCAACCAGAGAGCCCGGTGTCACGTTTGTAGCAGCCAAGTTTGACGGTATCCTTGGCCTCGGGTTTAAAGAAATCTCTGTTGGAGATACGGTTCCTGTTTGGTATAACATGATAACGCAAGGTCTTGTTCATGAACCCGTGTTTTCATTTTGGCTTAATCGCAATGCTGAAGAGGACGACGGCGGTGAACTTGTGTTTGGTGGAGTTGACATTAATCACTTCAGGGGTGAACACACATATGTCCCTGTAACTCAGAAAGGTTATTGGCAGTTTGAAATGGGTGATATCTTGATTAGTGGTAAACCAACCGGATTTTGTGCCAAGGGTTGTGCAGCAATTGCTGATTCTGGAACCTCTTTGTTGGCTGGTCCAACGGAGGTTATTACTAAAATCAATCAAGCAATTGGTGCTGTTGGTGTTATGACCCAACAATGCAAGTCATTTCTCAATCAGTATGGAAAAACTATAATTGAACTGCTACTTTCTGAGACACGACCCGAAAAAGTCTGCTCTCAAATGAACTTATGCTCCTTTGATGGTTCTCTTGAAACAAGCATGATAATTGAGAGTGTGGTTGACAAGAATGATGGAAAATCATCTGGTTTAGATGATCCGATGTGTACTCTCTGCCAGTCGGCCGTTGATTGGATGGAAACCAAGATACAGAGAAATGAAACCGAAGAAGACATAATCAACCATGTTGGTCAGTTGTGTGAACGGATACCGAGTCCAATGGGAGAATCCGGAGTCAACTGCGACAGTCTTTCGTCCATGCCCGATATTGCTTTTACCATTGGCTGTAAAACTTTTAACCTCTCCCCTAAAGATTATATCCTGAAAATTGGTGAGGGTGCATCAGCACAATGCATCAGTGGATTTACCGCTCTTGACGTGGGACCTCCTCGTGGGCCCCTGTGGATCCTCGGTGATATTTTTATGGGTAAATATCATACGGTGTTTGACTATGGTCGATTGCGAGTCGGGTTTGCAGAAGCTGTTTGA | 1731 | 42.58 | MYRISCLTPTHTRIALHCIAYYYCFCHAGYASSLFRYVSLHCCFNDVSNHYWYDDSDSGRGLILVTPLKMRSLFKARLLLLSIWLLLSPTAYSDPNDGLVRVGLKKRKINELNQIWLAGSNEGYARRSDGVEGNLRGLGADAIGLKNYLDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSAKCYFSVACLLHPKYKSSQSSSYKKNGKSAAIHYGTGSISGFFSKDYIKLGDLVVKEQDFIEATREPGVTFVAAKFDGILGLGFKEISVGDTVPVWYNMITQGLVHEPVFSFWLNRNAEEDDGGELVFGGVDINHFRGEHTYVPVTQKGYWQFEMGDILISGKPTGFCAKGCAAIADSGTSLLAGPTEVITKINQAIGAVGVMTQQCKSFLNQYGKTIIELLLSETRPEKVCSQMNLCSFDGSLETSMIIESVVDKNDGKSSGLDDPMCTLCQSAVDWMETKIQRNETEEDIINHVGQLCERIPSPMGESGVNCDSLSSMPDIAFTIGCKTFNLSPKDYILKIGEGASAQCISGFTALDVGPPRGPLWILGDIFMGKYHTVFDYGRLRVGFAEAV | 576 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial4g03562 | 576 | ProSiteProfiles | Saposin B type domain profile. | 446 | 487 | IPR008139 | - | |
| Bial4g03562 | 576 | Pfam | Saposin-like type B, region 1 | 448 | 485 | IPR007856 | GO:0006629(InterPro) | |
| Bial4g03562 | 576 | ProSiteProfiles | Saposin B type domain profile. | 383 | 423 | IPR008139 | - | |
| Bial4g03562 | 576 | SUPERFAMILY | Saposin | 384 | 485 | IPR011001 | - | |
| Bial4g03562 | 576 | Gene3D | Acid Proteases | 100 | 311 | IPR021109 | - | |
| Bial4g03562 | 576 | Pfam | Eukaryotic aspartyl protease | 152 | 575 | IPR033121 | - | |
| Bial4g03562 | 576 | PANTHER | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED | 94 | 575 | IPR001461 | GO:0004190(PANTHER)|GO:0004190(InterPro)|GO:0006508(PANTHER)|GO:0006508(InterPro) | |
| Bial4g03562 | 576 | ProSiteProfiles | Peptidase family A1 domain profile. | 153 | 573 | IPR033121 | - | |
| Bial4g03562 | 576 | Gene3D | Acid Proteases | 312 | 575 | IPR021109 | - | |
| Bial4g03562 | 576 | SUPERFAMILY | Acid proteases | 80 | 575 | IPR021109 | - | |
| Bial4g03562 | 576 | Gene3D | - | 383 | 485 | - | - | |
| Bial4g03562 | 576 | PRINTS | Pepsin (A1) aspartic protease family signature | 305 | 318 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Bial4g03562 | 576 | PRINTS | Pepsin (A1) aspartic protease family signature | 355 | 366 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Bial4g03562 | 576 | PRINTS | Pepsin (A1) aspartic protease family signature | 549 | 564 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Bial4g03562 | 576 | PRINTS | Pepsin (A1) aspartic protease family signature | 159 | 179 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Bial4g03562 | 576 | CDD | phytepsin | 143 | 574 | IPR033869 | GO:0004190(InterPro) | |
| Bial4g03562 | 576 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 355 | 366 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Bial4g03562 | 576 | Pfam | Saposin-like type B, region 2 | 386 | 419 | IPR008138 | - | |
| Bial4g03562 | 576 | FunFam | Lysosomal aspartic protease | 431 | 575 | - | - | |
| Bial4g03562 | 576 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 168 | 179 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Bial4g03562 | 576 | FunFam | Lysosomal aspartic protease | 139 | 381 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial4g03562 | K08245 | phytepsin [EC:3.4.23.40] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 26329 | Bial15g01514 | Bial4g03562 | |
| 189666 | Bial4g03562 | Bial24g02314 | |
| 363458 | Bial12g02463 | Bial4g03562 | |
| 374427 | Bial24g02314 | Bial4g03562 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr12:54880879 | Bial4g03562 | Bial-Chr4:80804997 | dispersed | |
| Bial | Bial-Chr15:57060230 | Bial4g03562 | Bial-Chr4:80804997 | dispersed | |
| Bial | Bial-Chr24:53762331 | Bial4g03562 | Bial-Chr4:80804997 | dispersed | |
| Bial | Bial-Chr4:80804997 | Bial7g01076 | Bial-Chr7:42344371 | dispersed | |
| Bial | Bial-Chr12:54894441 | Bial4g03562 | Bial-Chr4:80804997 | wgd | |
| Bial | Bial-Chr24:53775115 | Bial4g03562 | Bial-Chr4:80804997 | wgd | |
| Bial | Bial-Chr3:56911526 | Bial4g03562 | Bial-Chr4:80804997 | wgd |