AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03580 ATGAAATACAATGAAATCTCCCACTTTAGCCACCCACAACACCGGCTCAAGCCGAGCTACACCGAGGCCCCATTCAAGTGCGACGGGTGCAAGGAAGTCGGCATAGGGTCCAACTACAAATGCACAAAATGTAACTATGACTTACATGTTCATTGTGCCCTTCCTACCCCTTCTATAACCCACCCATTTTACACTAAGTGCTCATTTCAATTCTTGTCACGCCCTCCAGGCCCCATAGCGCGTTATTGCAATGCGTGTGAGAAAGCGGTGTCAGGGTTCGTTTACCATTGCAAGTTGTGTGGGTTCGACCTTCACCCGTGTTGTGCTAAGCTTCCAACTATGTTGGATGATGGTGAGGTGGAGTTGTACTTGTATAGAAAAGTGGGGTCCGCCTGCCACAGGTGTGGCAGGACAGGACGTAGTTGGAGTTACAGGTCAAAGTGCAAGAAGTACAACTTGCATGTGGCTTGTGTGAAAGAGATGTTGGTAGAGAGTTGGCATGAGTTATACTTTGGTAGAAGTGGTGTGAGTGGTAAATACCATGATTTGTGTGGGCAAAATGGTAAAACAATAGAGACAAGAATTCCAAGCTTGAAGGGTACATTGGAAAGCTATCATCACCATAGACATCATAAAAGCAAAGGCAAAGTGAAGAAATGTTGTGAGATGGCTGGTTTGGCAATGCAGTTTGTGATTTCGGCGGTTCTTGGTGATCCGACTACTCTAATCGCTGGTGTCGTTGGTGCTTTGATGTCGGAATAG 762 46.33 MKYNEISHFSHPQHRLKPSYTEAPFKCDGCKEVGIGSNYKCTKCNYDLHVHCALPTPSITHPFYTKCSFQFLSRPPGPIARYCNACEKAVSGFVYHCKLCGFDLHPCCAKLPTMLDDGEVELYLYRKVGSACHRCGRTGRSWSYRSKCKKYNLHVACVKEMLVESWHELYFGRSGVSGKYHDLCGQNGKTIETRIPSLKGTLESYHHHRHHKSKGKVKKCCEMAGLAMQFVISAVLGDPTTLIAGVVGALMSE 253
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03580 253 Gene3D - 12 58 - -
Bial4g03580 253 ProSiteProfiles Zinc finger phorbol-ester-DAG-type profile. 13 67 IPR002219 -
Bial4g03580 253 PANTHER CYSTEINE-HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 250 - -
Bial4g03580 253 Pfam C1 domain 9 53 IPR004146 -
Bial4g03580 253 Pfam C1 domain 74 109 IPR004146 -
Bial4g03580 253 SUPERFAMILY Cysteine-rich domain 37 114 IPR046349 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03580 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
27218 Bial15g03240 Bial4g03580
32749 Bial3g03010 Bial4g03580
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr15:79791360 Bial4g03580 Bial-Chr4:80981913 wgd
Bial Bial-Chr3:74611531 Bial4g03580 Bial-Chr4:80981913 wgd