AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03584 ATGGATGGTGCAGCAACAATTGGATTACAGCCTGCTGATACAAAAACAAAAGACGGTGAGAAAGATGAAAATCTCATATTTGTTGCAGGAGCAACCGGCAAAGTTGGTTCAAGAACAGTAAGGGAACTTTTGAAGTTAGGATTTAATGTTCGAGCTGGTGTACGAAGCACTCAAAGAGCAGAATCTTTGGTGAAGTTAGTATGTAAGGAAATATGCCCACTCTGTAGTCCAGCTATAGAGAAGCTTCAACTTGTGGAGTGTGATTTGGAGAAACCAGAGCAGATTAAGCCTGCATTGGGCAATGCTTCAACGGTTATATGTACCATTGGCGCGAGTGAGAAGGAGATATTTGATGTTACTGGGCCCTACCGAATTGACTTTCAAGCCACAAAGAACCTTATTGATGCAGCTGCTGCTGCAAAAGCGAAACACTTTATTTTGGTTACTTCTTTGGGAACAAACAAGTTTGGATTTCCTGCTGCTGTATTGAAAAAGGCTGAAGAAGCGTTACTTGCTAGCGGGATTCCTTACACTATAGTGAGACCTGGAGGCATGGAGCGTCCTACAGACTCCTTCAAGGAAACACATAATCTTACCCTCTCTCTAGAAGATACTTTATTTGGTGGTCTAGTTTCAAATTTACAGGTGGCAGAACTCCTTGCGTTTATGGCTAAAAATCCTAATCTTTCATATTGTAAAGTAGTTGAAGTAGTTGCCGAAACAACAGCACCATTGACCCCCATGGGTGATCTCTTAACAAAAATACCACCTCAACGCCCTATACCTCCCCAACCTAAGGAACCGGAGCCGGAAGTTATCAAGGAACCAGAGCCGGAAGTTATCAAAGAACCTGAACCTGTTTCCAAAAGCACTATAACTGAGACTTCGAGCGTTGCCACTGAACCACAAGTCGAGTCAAAAATTGCTTCCTCAAGACCACTTTCTCCATACACCGCTTATGAAGGTTTGAGACCCCCTTCATCCCCGACTCCATCACCACCTGGCGGCAGTAAGGCGGTGGTTGAAGCAGTATCAGCTCCTCCTACTGTTCCTGAAACTAGCACAGAAGTGGAAACAGTTACTATTACAACCGAACCTCAACCAGTGGCTGCAGAATTGCCGAAATCCAGACCTCTCTCTCCTTATACCGCCTATGAAGGTTTGAAACCCCCTTCATCCCCGACTCCATCAGGCGGCAGTAAAGCAGTGGTTGAAGCAGTATCAGTTCCTCCTACTGTTCCTGAAACTAGTACACCAGTGGACACAATTACATTTGCATTTACAACCGAACCTCCACCAGTGGCTGCAGAATTGCCGAAACCTAGACCTCTCTCTCCTTATACCGCGTAA 1350 44.96 MDGAATIGLQPADTKTKDGEKDENLIFVAGATGKVGSRTVRELLKLGFNVRAGVRSTQRAESLVKLVCKEICPLCSPAIEKLQLVECDLEKPEQIKPALGNASTVICTIGASEKEIFDVTGPYRIDFQATKNLIDAAAAAKAKHFILVTSLGTNKFGFPAAVLKKAEEALLASGIPYTIVRPGGMERPTDSFKETHNLTLSLEDTLFGGLVSNLQVAELLAFMAKNPNLSYCKVVEVVAETTAPLTPMGDLLTKIPPQRPIPPQPKEPEPEVIKEPEPEVIKEPEPVSKSTITETSSVATEPQVESKIASSRPLSPYTAYEGLRPPSSPTPSPPGGSKAVVEAVSAPPTVPETSTEVETVTITTEPQPVAAELPKSRPLSPYTAYEGLKPPSSPTPSGGSKAVVEAVSVPPTVPETSTPVDTITFAFTTEPPPVAAELPKPRPLSPYTA 449
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03584 449 CDD SDR-a5 26 241 - -
Bial4g03584 449 MobiDBLite consensus disorder prediction 268 284 - -
Bial4g03584 449 FunFam Protein TIC 62, chloroplastic 22 258 - -
Bial4g03584 449 MobiDBLite consensus disorder prediction 247 403 - -
Bial4g03584 449 Pfam NAD(P)H-binding 30 227 IPR016040 -
Bial4g03584 449 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 255 IPR036291 -
Bial4g03584 449 MobiDBLite consensus disorder prediction 348 366 - -
Bial4g03584 449 MobiDBLite consensus disorder prediction 434 449 - -
Bial4g03584 449 MobiDBLite consensus disorder prediction 288 313 - -
Bial4g03584 449 Gene3D - 22 255 - -
Bial4g03584 449 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 13 448 IPR044719 -
Bial4g03584 449 MobiDBLite consensus disorder prediction 430 449 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03584 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr4:81033588 Bial22g00987 Bial-Chr22:9650999 transposed
Bial Bial-Chr4:81033588 Bial10g01396 Bial-Chr10:14031350 transposed