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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03608 ATGGCCGAAAATCTCATCCAAAGGCTCGAAGCCGCGGTGACGCGGCTCGAATCCTTCTCCCGCGGCGGTTCGCAGCCGCAAACCGCCGGATCCGGATCGTCTGATCCGTCAATCGTCGCATTCGATGATCTGATCACCGAATACGTCGAAAAAGTGTCCGATGCGGCCGAGAAGATCGGCGGACAGATTAAGGATGTCACGAGTGTGCTCGGTCGCGCGTTCGACGCGCAGAAGGAGCTGCTCGTTAAGATCAAACAAACGCAGAAACCTGATGCTGGAGGATTGGGTGAATTCCTCAAGCCATTAAATGAAAAACTCGGTGAAGCAACTCACATGACAGAAGGACCGCGTTCTGATTTCTTCAACCACTTAAAAGCTGTTGCAGAAAGTTTAACAGCTTTAGCTTGGATTGCATATACAGGGAAAAACTGCGGAATGAGCATGCCTATTTCACATGTTGAAGAATGTTGGCAGTCTGCTGAGTTTTACAGTAACAAGGTTCTTGTAGAATTCAAAAACAAAGATCCAAGCCACGTGGAATGGACTCGAGCTCTGAAGGAACTATATGTACCAGGGTTAAGGGATTATGTTAAAACTCACTATCCGTTAGGACCCGTATGGAGTGCAACAGGAGCAACTGTATCTGGTCCATCAAAGTCTTCTAAACCAGCTGCTCCAAATCCGCCACCAGCTTCACTTGCCAGCTCATCAACTGCATCGTCATCTTCTTCCGCTCCAAAACAAGGAATGTCTGCTGTTTTCCAAGAAATTAGTTCAAAGCCCGTTACTGCAGGATTAAAGAAAGTTACAGATGATATGAAGACGAAAAACCGTACAGATAGAGCCGGATTTGTGAGTTCGGTTGAAAAAGAACCTAAAAAGAATGTCGCAGCGGCTGCTAAAGTTGGTCCTCCTAAATTCGAGCTTGTAATGGGTCGAAAATGGGTTGTTGAGAATCAAATTGGCGCGAAGGATTTGTCGATTGATGATTGTGATCCAAAGCAGACAGTTTATATTTTTGGATGCAAAGATTCAGTTCTTCAGGTCAAAGGGAAAGTTAACAACATAACTGTCGATAAATGCACGAAAATGGGCGTTGTATTCACGGATGTTGTTGCTGCCTTTGAGATGGTTAATTGCAGCAGTCTTGAGGTGCAATGTCAGGGTTCAGCACCAACTATTTCAATAGATAACACATCAGGTTGCCAGCTGTACTTGAGCAAAGATTCTCTAGAATCTTCTATCACAACTTCTAAGGCAACTGAAGTTAATGTTTTGGTACCTGCTGAAGATCCTGATGCTGATCAGGCGGAGCATGCAATGCCGCAAATGTACCTTCACACTTACAAAGACGGCCAATTTATTACAACCCCAGTCTCGCATTCCGGAGGCTAA 1395 45.38 MAENLIQRLEAAVTRLESFSRGGSQPQTAGSGSSDPSIVAFDDLITEYVEKVSDAAEKIGGQIKDVTSVLGRAFDAQKELLVKIKQTQKPDAGGLGEFLKPLNEKLGEATHMTEGPRSDFFNHLKAVAESLTALAWIAYTGKNCGMSMPISHVEECWQSAEFYSNKVLVEFKNKDPSHVEWTRALKELYVPGLRDYVKTHYPLGPVWSATGATVSGPSKSSKPAAPNPPPASLASSSTASSSSSAPKQGMSAVFQEISSKPVTAGLKKVTDDMKTKNRTDRAGFVSSVEKEPKKNVAAAAKVGPPKFELVMGRKWVVENQIGAKDLSIDDCDPKQTVYIFGCKDSVLQVKGKVNNITVDKCTKMGVVFTDVVAAFEMVNCSSLEVQCQGSAPTISIDNTSGCQLYLSKDSLESSITTSKATEVNVLVPAEDPDADQAEHAMPQMYLHTYKDGQFITTPVSHSGG 464
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03608 464 FunFam Adenylyl cyclase-associated protein 303 463 - -
Bial4g03608 464 Pfam CAP N-terminal conserved motif 3 34 IPR013992 GO:0003779(InterPro)|GO:0007010(InterPro)
Bial4g03608 464 SMART carp 380 417 IPR006599 -
Bial4g03608 464 SMART carp 342 379 IPR006599 -
Bial4g03608 464 ProSiteProfiles C-CAP-cofactor C-like domain profile. 304 441 IPR017901 -
Bial4g03608 464 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 304 463 IPR036223 -
Bial4g03608 464 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Bial4g03608 464 MobiDBLite consensus disorder prediction 212 250 - -
Bial4g03608 464 Pfam CAP, N-terminal domain 41 203 IPR053950 -
Bial4g03608 464 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 37 230 IPR036222 -
Bial4g03608 464 MobiDBLite consensus disorder prediction 17 36 - -
Bial4g03608 464 MobiDBLite consensus disorder prediction 18 35 - -
Bial4g03608 464 FunFam Adenylyl cyclase-associated protein 37 212 - -
Bial4g03608 464 Gene3D - 303 463 IPR016098 -
Bial4g03608 464 MobiDBLite consensus disorder prediction 231 250 - -
Bial4g03608 464 Gene3D - 37 212 IPR036222 -
Bial4g03608 464 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 3 462 IPR001837 GO:0003779(InterPro)|GO:0003779(PANTHER)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER)
Bial4g03608 464 Pfam Adenylate cyclase associated (CAP) C terminal 304 461 IPR013912 GO:0003779(InterPro)|GO:0007010(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03608 K17261 adenylyl cyclase-associated protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
27237 Bial15g03262 Bial4g03608
32758 Bial3g03032 Bial4g03608
32771 Bial3g03064 Bial4g03608
189672 Bial4g03608 Bial24g02369
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr12:55502251 Bial4g03608 Bial-Chr4:81511220 wgd
Bial Bial-Chr15:79986304 Bial4g03608 Bial-Chr4:81511220 wgd
Bial Bial-Chr16:74527546 Bial4g03608 Bial-Chr4:81511220 wgd
Bial Bial-Chr24:54438217 Bial4g03608 Bial-Chr4:81511220 wgd
Bial Bial-Chr3:75157616 Bial4g03608 Bial-Chr4:81511220 wgd
Bial Bial-Chr3:74824458 Bial4g03608 Bial-Chr4:81511220 wgd