Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial4g03653 | ATGGAAACTAAACACAACCTCAAGCTCGCATTTACAGTCACCTGTCTCGCCATAGCTTCAATTCTACTAGCCAACAGTTATCGTAAACAACGGAAGCGTAAACAGAAGATAAACTCGTCGTGTTACTTGAAATCGGAAGATAAACCGCAGCATAAGTTCAAGCGTGTGCTGGCGAATAACTCGTATGCTCCGTTTAAGCACTTGAAGATTGACGAAAATTCATCGGATTTGCATCCGTATGAATCAGAGATCAAGGCTCTGTTGGAAAAGTCACCACTAGAAGTTGAATTCTCTAATGGAATTATGGATATGAGCATGAGTGATAACTATGTTTGGATTGACGATGAATCAAAGTTAAAAGCACTTGTTGAGGTTCTGAGTAAGGAAAAAGTGTTTGCTGTGGATACTGAACAGCATAGCTTTCGGTCATTTTTAGGGTTCACGGCTCTTATTCAGATTTCGACTAGAGACGAAGATTATTTGGTGGACACGATTGCTGTTCATGATATTATGGGACTTCTCGGCCCTGTATTTGCCAATCCGAATATATGCAAGGTGTTCCATGGTGCTGATAATGATGTTATATGGCTACAAAGGGATTTTCATATTTATGTTGTAAACTTATTTGACACTGCTAAGGCTTGTGACGTGTTATCTAAACCTCAGAGATCATTAGCCTACTTACTTGAAACATATTGTGGTGTTACCACTAACAAGCTATACCAGCGTGAAGATTGGCGACAACGTCCACTACCAGTAGATATGGTTGAGTATGCTCGGATGGATGCACATTATTTGCTTTATATTGCAGATTGTCTTGTTTCCGAGCTCAAAAACCAGAAAAACGTGGATGAATTCATCTTCAAACATTGCAGTTTGAGAAAAACCACTTTTACAGATAATAGTGCATCAGAAAATTCAGCCGGTCTTGATGACAAATTGTATTTTGTTTCCGAGGTCAACCGGCGTTCGAATGCCCTGTGTCTGCAACTCTTCACCAAAGATCTAGAAGCTTCCCCAGGGCAGTCTGCAGCTTCTTCTATTATTTCTCGCCATTTAAATGATCATGGAAGTTCTACAAACAACAGTCAGTTTCAGGATCTTGTAAGACGTCTATGCTCTTGGAGGGATTTGATGGCCCGTATGCATGACGAGAGCCTTAAATATGTGCTATCTGATAACGCTATCGTCTCTCTGGCTGAAAAAGTTCCATCAACTCCAACAGACATTTGCACTACAATATCACAAGCCGATATAGACATAGACATTCCAAATTCCAGTTCCACCCCTATGTTTCCATCCTCTGTTGTCTTGAGTCATTTGGATGACTTCCCTTACCTCCTCCAAAATGAGATAACTAATCTTGATGATTTATTTCAACTAATTCTCAAAAAGCACCTCGGTCCAAACGGTTCATGTCCTTTTTCACTTTATAACTATAGTCTACTTTCTAAAACTAATATCAATTCATCAAAGAGATTGGTTTCAAAGGCAAGTGGACACAGGTTTTCAAAAAAAGTTGCTCGCAAGATTTCTCGAGAGCTTTTTGTTCAGAAGTTTTCTTGCAAAGCTCCTGTGTATCATAACTGCAGGATATATGCTAATGATGGAAGATTGTTGTGCTACTGTGATCGAAGGAAGCTTGAATGGTATTTGCAGCGGGACCTAGCAAAACTCGTTGACGAAGACCCACCCGCGATAATGCTTCTTTTTGAACCGAAAGGTCGCCCAGAAGACGAAGGAAATGACTTTTACATTCAAAGTAAAAAAAACATATGTGTAGGGTGTGGTGAAGGAAATCACTACTTACGGTACCGTATAATCCCATCATGCTACAGAATACACTTTCCCGAACATTTAAAAAGCCACCGGTCTCATGATATTGTTTTGGTGTGTGTTGATTGCCATGAAAAAGCACATTCATCTGCTGAAAAGTACAAAAAGAAAGTAGCTTTAGAATTCGGGATACCATTATTTGTACATAAAGTGGTTAATTCTAGTGAGGAAGATGTTTCTGGATCTTCGTCATCTGTTGTGAAACTTGGTGATAGTGGTGTGTCTCCTTTGGAGTTGAGAACGGCTGCAATGGCTCTTTTAAGGCATGGTCCACGGATGCCACCTCAGCGCCGTGAGGAGTTGACACAGGTTGTCAAGAAATATTATGGAGGAAGAGATATATCCGACGAAGATTTAGAAAACGCTTTATTAGTAGGAATGAGTCCGCACGAAAAAAGACGGTTACGTAAGAAAAAAGGCATATCTTTTAGCAATACTTCTCCAACTAACATTGTTTCTGACAATGACGTTAAGGAAAACAATGGACTTCATGAGTCCGAGAATGGTTCCAATCCGGATATTACGGACCATTCTGAACAAAACGGGCTGGGTCATCCGAGTTCTGATGGGGCGGTCTGTAGTTCAAAGTTATCGCTGTTAGGGCATGGCCCACATGGGAAACAAGTAGTTGATTATTTGCTGAAGAATCATGGGGAAGTTGGGATTCAGGAGTTTTGTCAAAGATGGAGACAAGTGTTTGTTGAGAGTATTAATCCTCGGTTTTTACCTGGTGGTTGGGATGTCACTCACAGCGGTAGAAGAGAGTTTGGGGACTTCAGTGTATACAATTTAGCAAATAAGGCTTCTGTTGGTGCTAAGGATTAA | 2661 | 40.51 | METKHNLKLAFTVTCLAIASILLANSYRKQRKRKQKINSSCYLKSEDKPQHKFKRVLANNSYAPFKHLKIDENSSDLHPYESEIKALLEKSPLEVEFSNGIMDMSMSDNYVWIDDESKLKALVEVLSKEKVFAVDTEQHSFRSFLGFTALIQISTRDEDYLVDTIAVHDIMGLLGPVFANPNICKVFHGADNDVIWLQRDFHIYVVNLFDTAKACDVLSKPQRSLAYLLETYCGVTTNKLYQREDWRQRPLPVDMVEYARMDAHYLLYIADCLVSELKNQKNVDEFIFKHCSLRKTTFTDNSASENSAGLDDKLYFVSEVNRRSNALCLQLFTKDLEASPGQSAASSIISRHLNDHGSSTNNSQFQDLVRRLCSWRDLMARMHDESLKYVLSDNAIVSLAEKVPSTPTDICTTISQADIDIDIPNSSSTPMFPSSVVLSHLDDFPYLLQNEITNLDDLFQLILKKHLGPNGSCPFSLYNYSLLSKTNINSSKRLVSKASGHRFSKKVARKISRELFVQKFSCKAPVYHNCRIYANDGRLLCYCDRRKLEWYLQRDLAKLVDEDPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLVCVDCHEKAHSSAEKYKKKVALEFGIPLFVHKVVNSSEEDVSGSSSSVVKLGDSGVSPLELRTAAMALLRHGPRMPPQRREELTQVVKKYYGGRDISDEDLENALLVGMSPHEKRRLRKKKGISFSNTSPTNIVSDNDVKENNGLHESENGSNPDITDHSEQNGLGHPSSDGAVCSSKLSLLGHGPHGKQVVDYLLKNHGEVGIQEFCQRWRQVFVESINPRFLPGGWDVTHSGRREFGDFSVYNLANKASVGAKD | 886 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial4g03653 | 886 | MobiDBLite | consensus disorder prediction | 746 | 801 | - | - | |
| Bial4g03653 | 886 | SUPERFAMILY | Ribonuclease H-like | 48 | 284 | IPR012337 | - | |
| Bial4g03653 | 886 | PANTHER | POLYMYOSITIS-SCLERODERMA AUTOANTIGEN-RELATED | 31 | 876 | IPR045092 | GO:0000175(PANTHER)|GO:0000175(InterPro)|GO:0000176(PANTHER)|GO:0000467(PANTHER)|GO:0000467(InterPro)|GO:0003727(PANTHER)|GO:0005730(PANTHER)|GO:0071035(PANTHER)|GO:0071036(PANTHER)|GO:0071037(PANTHER)|GO:0071038(PANTHER)|GO:0071039(PANTHER)|GO:0071040(PANTHER)|GO:0071044(PANTHER)|GO:0071051(PANTHER) | |
| Bial4g03653 | 886 | SUPERFAMILY | HRDC-like | 356 | 414 | IPR010997 | GO:0000166(InterPro)|GO:0044237(InterPro) | |
| Bial4g03653 | 886 | Gene3D | HRDC domain | 353 | 459 | IPR044876 | - | |
| Bial4g03653 | 886 | Pfam | HRDC domain | 366 | 409 | IPR002121 | GO:0003676(InterPro) | |
| Bial4g03653 | 886 | Pfam | 3'-5' exonuclease | 110 | 277 | IPR002562 | GO:0003676(InterPro)|GO:0006139(InterPro)|GO:0008408(InterPro) | |
| Bial4g03653 | 886 | ProSiteProfiles | HRDC domain profile. | 362 | 451 | IPR002121 | GO:0003676(InterPro) | |
| Bial4g03653 | 886 | MobiDBLite | consensus disorder prediction | 776 | 801 | - | - | |
| Bial4g03653 | 886 | SMART | 35exoneu6 | 110 | 278 | IPR002562 | GO:0003676(InterPro)|GO:0006139(InterPro)|GO:0008408(InterPro) | |
| Bial4g03653 | 886 | FunFam | Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain | 47 | 338 | - | - | |
| Bial4g03653 | 886 | CDD | Rrp6p-like-exo | 106 | 285 | IPR049559 | - | |
| Bial4g03653 | 886 | MobiDBLite | consensus disorder prediction | 753 | 769 | - | - | |
| Bial4g03653 | 886 | Gene3D | - | 41 | 312 | IPR036397 | GO:0003676(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial4g03653 | K12951 | cobalt/nickel-transporting P-type ATPase D [EC:7.2.2.-] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 189604 | Bial4g03653 | Bial16g02998 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr10:4520378 | Bial4g03653 | Bial-Chr4:82201492 | dispersed | |
| Bial | Bial-Chr19:54390760 | Bial4g03653 | Bial-Chr4:82201492 | dispersed | |
| Bial | Bial-Chr4:82201492 | Bial7g01338 | Bial-Chr7:45971721 | dispersed | |
| Bial | Bial-Chr16:75114889 | Bial4g03653 | Bial-Chr4:82201492 | wgd |