AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial4g03668 ATGGCTTCCACCAACCGTTCAATATCACAACAAGCATTCAACGACTTAGTAACCGAAAACATAACCGATCTCGGCATGGAACCATCCGAAGCCCTAGCCGACGCAATCGAAACCCTAACTCTTCAAAACGTCGATCTCTCCGGCATTATCACCGATACACTTCCCGGCGAGTCCAATCCGGTGATTGAGGTGTTAGATCGAATCAAACAGTTGTTGTTACAGGTGTCTGATTGGACCGGTAATGAAGTTGTTGTTAGTGAGGTGTTTGAGAGGTTGTTGGAAGTGTTGCGAGATGGTTCGGGGAGTAACGGTGCGGTTGGTTCGAGGAATGGAGGTGTGGAGTTGATGTGTGGTGTGTGTGCGAAAGCGAGTGGTTCGGTAGTAGTCGTATCGGCGGCTTTAGATGCGTTGGCTTTGTTTCTGAATGATCTTCAAAGTACAGAAACATTTATGCAAAGTGGAGGACCGAAAATGTTGATGGAGATTCTAACCAAAGAAACGGAAAATGTGAATATCTTGAACAGTGGTTTTTCTGTTGTTGCTGCTGCTTCAACCGGTAATGAGGTTATTAAGGAATCTTTTGTGGAATTACACATAGATGAGTTAATGGTTACAATTATGAAGAAACATAACAAAGTATGCATTCCTAGTTTATACGACGCTATTAGAGTGCTTTTGGCTGCTGATGATAACCGTGTAGTGGCTTCACAAGTTTATGGGTATGCTCGACAATTTGCCAAAGTTGGAATTGCTGAAGCTCTTGTTGAGTCATTGAATGATGGAATTAACTCACCGGGTCTTGTGTCAGCAACTATTGCACTAAAAGCCGTTGCAGTGAATGATGAAATATGCAGGACAGTTGCTGAAAAAGGTGGTATAGATTCATTACTCACTTGTATCGATGACTCTGGTGTACAAGGAAATAAAACTGTGGCTAAAGCTTGTTGCTCCTTATTATCAAAGGTGATGACCATCATATGCACCCTGTGCTTGCGGTCACCCGCAACCGCATCTTTGGCAATGGAAGCAGGAGCCGGAGACCTTGCTATTCAATCAATGCAACGGTTTCCTAACTCGTATCAACTGCAGAAGAACGCTTGCCTTATGATCCGTAATCTTGTTGCCAGAAACCCCGAAAACAGGCCGGTTTTATTGAGTAATGGTATTGAGAAGATAATAAGGAATGCTAAGGAAAGTCACAAAAGCTGTCGAGATGCAGCCGTTGCTGCTCTTCGAGACTTGGGGCTTGACAACTACAACTCTTAG 1266 43.76 MASTNRSISQQAFNDLVTENITDLGMEPSEALADAIETLTLQNVDLSGIITDTLPGESNPVIEVLDRIKQLLLQVSDWTGNEVVVSEVFERLLEVLRDGSGSNGAVGSRNGGVELMCGVCAKASGSVVVVSAALDALALFLNDLQSTETFMQSGGPKMLMEILTKETENVNILNSGFSVVAAASTGNEVIKESFVELHIDELMVTIMKKHNKVCIPSLYDAIRVLLAADDNRVVASQVYGYARQFAKVGIAEALVESLNDGINSPGLVSATIALKAVAVNDEICRTVAEKGGIDSLLTCIDDSGVQGNKTVAKACCSLLSKVMTIICTLCLRSPATASLAMEAGAGDLAIQSMQRFPNSYQLQKNACLMIRNLVARNPENRPVLLSNGIEKIIRNAKESHKSCRDAAVAALRDLGLDNYNS 421
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial4g03668 421 PANTHER UNCHARACTERIZED 3 50 - -
Bial4g03668 421 Gene3D - 321 420 IPR011989 -
Bial4g03668 421 Gene3D - 65 320 IPR011989 -
Bial4g03668 421 SUPERFAMILY ARM repeat 72 414 IPR016024 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial4g03668 K24166 armadillo repeat-containing protein 6
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Event-related genes

Select Gene_1 Gene_2 Event_name
189612 Bial4g03668 Bial16g03015
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr4:82478788 Bial4g03670 Bial-Chr4:82496343 proximal
Bial Bial-Chr16:75341314 Bial4g03668 Bial-Chr4:82478788 wgd