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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial5g03055 ATGGATATGCAAACTGATTTCGATCGTCTTCTGTTCTTCGAACACGCTCGCCGTGCTGCTGAAGTCACCTACACCAAAAACCCTCTAGATACCGAGAACTTGACCCGATGGGGAGGTGCTTTGCTCGAGTTATCAACCTTTCAGAGTGTTCAGGAATCGAAGTCCATGATTAAAGAGGCGATATCGAAACTGGATGAAGCGTTATCGATTGATCCGAAGAAGCATGATGCTTTGTGGTGTATGGGCAATGCGCAGACTTCGTATGCGTTTTTGACTCCGGATAAAGATGAAGCCAAGGGTTATTTTGATTCCGCTTATGTCTTCTTTAAGCAGGCTGTTGATGAGGATCCAGAGAACGAACTTTACCGCAAATCATTTGAAGTGGCGACAAAGGCTCCTGAACTACATGCAGAGGTCCATAAACAAAGTTTTAGTCAACAAGTTGTGGCACCCGGGCCCAGGGGAGGTCCATCGACTTCTTCAAATGTGAAGGGTGCAAAGGCGCAAAAGAGCAGTGATCTGAAGTATGACATATTTGGATGGGTTATTCTTGCGGTTGGTATTGTGGCGTGGGTTGGATTCGCCAAGTCAAACGTACCACCACCACCGCAACATTAA 618 46.44 MDMQTDFDRLLFFEHARRAAEVTYTKNPLDTENLTRWGGALLELSTFQSVQESKSMIKEAISKLDEALSIDPKKHDALWCMGNAQTSYAFLTPDKDEAKGYFDSAYVFFKQAVDEDPENELYRKSFEVATKAPELHAEVHKQSFSQQVVAPGPRGGPSTSSNVKGAKAQKSSDLKYDIFGWVILAVGIVAWVGFAKSNVPPPPQH 205
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial5g03055 205 Gene3D Tetratricopeptide repeat domain 1 149 IPR011990 GO:0005515(InterPro)
Bial5g03055 205 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 1 204 IPR010547 GO:0005742(InterPro)|GO:0045040(InterPro)
Bial5g03055 205 MobiDBLite consensus disorder prediction 146 166 - -
Bial5g03055 205 Pfam Plant specific mitochondrial import receptor subunit TOM20 7 196 - -
Bial5g03055 205 SUPERFAMILY TPR-like 13 124 IPR011990 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial5g03055 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
190829 Bial18g03224 Bial5g03055
193268 Bial14g01335 Bial5g03055
198206 Bial21g00012 Bial5g03055
199475 Bial5g03055 Bial18g03224
370939 Bial18g03224 Bial5g03055
373188 Bial21g00012 Bial5g03055
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr5:76688673 Bial9g02806 Bial-Chr9:73963994 dispersed
Bial Bial-Chr14:24735670 Bial5g03055 Bial-Chr5:76688673 wgd
Bial Bial-Chr18:80852244 Bial5g03055 Bial-Chr5:76688673 wgd
Bial Bial-Chr18:81064151 Bial5g03055 Bial-Chr5:76688673 wgd
Bial Bial-Chr2:28320203 Bial5g03055 Bial-Chr5:76688673 wgd