AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial8g00361 | ATGTCGAACGAGAAGGAACGAGAGACGCATGTTTACATGGCGAAACTAGCCGAACAAGCCGAGCGTTACGAAGAGATGGTTGAATGCATGAAAAGTGTTGCGAAACTAAACGTTGAGCTAACCGTGGAAGAGCGAAACCTGCTTTCGGTCGGGTACAAGAATGTGATTGGTGCAAGAAGAGCATCATGGAGGATCATGTCATCCATTGAACAAAAAGAGGAATCAAAAGGAAATGAAAACAATGTTACACTTATTAAAGGCTACTGCAAAAAAGTTGAAGATGAACTTGCTAAAATTTGCAGTGACATTCTTGAAATTATTGATAAGCATCTTATTCCATCTTCTGGATCAGGAGAAGCTACTGTTTTTTACCACAAGATGAAAGGTGATTATTATAGGTACCTTGCTGAATTCAAGACAGATCAAGAAAGGAAGGATGCTGCTGAACAGTCGTTGAAGGGCTATGAGGCGGCTGCTGCGGCTGCAAACACAGAACTCCCTTCAACCCACCCGATTCGTCTCGGTTTGGCTCTCAACTTCTCAGTGTTTTATTATGAGATCATGAACTCACCCGAAAGGGCCTGTCATCTGGCTAAACAAGCATTTGACGAGGCGATTGCTGACCTGGACTCGTTAAGCGAAGAATCTTACAAAGACAGCACATTAATCATGCAGCTTTTAAGAGATAACCTCACTCTTTGGACCTCTGATTTACCTGAGGATGGAGGTACTGCAAGTGATGAAAAGGGTGAAGAGCCCAAATCAGCCGCAGCCGCAGAGGTTAGCGCTGCATTTTAG | 798 | 43.73 | MSNEKERETHVYMAKLAEQAERYEEMVECMKSVAKLNVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVTLIKGYCKKVEDELAKICSDILEIIDKHLIPSSGSGEATVFYHKMKGDYYRYLAEFKTDQERKDAAEQSLKGYEAAAAAANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIADLDSLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGTASDEKGEEPKSAAAAEVSAAF | 265 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial8g00361 | 265 | SUPERFAMILY | 14-3-3 protein | 6 | 237 | IPR036815 | - | |
| Bial8g00361 | 265 | ProSitePatterns | 14-3-3 proteins signature 2. | 217 | 236 | IPR023409 | - | |
| Bial8g00361 | 265 | SMART | 1433-4 | 7 | 248 | IPR023410 | - | |
| Bial8g00361 | 265 | MobiDBLite | consensus disorder prediction | 238 | 265 | - | - | |
| Bial8g00361 | 265 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
| Bial8g00361 | 265 | PANTHER | 14-3-3 PROTEIN | 6 | 240 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
| Bial8g00361 | 265 | FunFam | 14-3-3 protein epsilon | 1 | 249 | - | - | |
| Bial8g00361 | 265 | Pfam | 14-3-3 protein | 13 | 235 | IPR023410 | - | |
| Bial8g00361 | 265 | PIRSF | 14-3-3 | 1 | 251 | IPR000308 | - | |
| Bial8g00361 | 265 | Coils | Coil | 145 | 165 | - | - | |
| Bial8g00361 | 265 | Gene3D | - | 1 | 245 | IPR036815 | - | |
| Bial8g00361 | 265 | Coils | Coil | 13 | 33 | - | - | |
| Bial8g00361 | 265 | PRINTS | 14-3-3 protein zeta signature | 154 | 180 | IPR000308 | - | |
| Bial8g00361 | 265 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
| Bial8g00361 | 265 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
| Bial8g00361 | 265 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
| Bial8g00361 | 265 | PRINTS | 14-3-3 protein zeta signature | 208 | 237 | IPR000308 | - | |
| Bial8g00361 | 265 | PRINTS | 14-3-3 protein zeta signature | 181 | 207 | IPR000308 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial8g00361 | K06630 | 14-3-3 protein epsilon |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr5:60444649 | Bial8g00361 | Bial-Chr8:4010881 | dispersed | |
| Bial | Bial-Chr7:62348869 | Bial8g00361 | Bial-Chr8:4010881 | dispersed | |
| Bial | Bial-Chr8:4010881 | Bial8g03221 | Bial-Chr8:74691921 | dispersed | |
| Bial | Bial-Chr1:1684953 | Bial8g00361 | Bial-Chr8:4010881 | wgd | |
| Bial | Bial-Chr13:2457274 | Bial8g00361 | Bial-Chr8:4010881 | wgd | |
| Bial | Bial-Chr18:2720949 | Bial8g00361 | Bial-Chr8:4010881 | wgd | |
| Bial | Bial-Chr2:83584502 | Bial8g00361 | Bial-Chr8:4010881 | wgd | |
| Bial | Bial-Chr20:1436282 | Bial8g00361 | Bial-Chr8:4010881 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Bial12g01210 | . | 11 | 254 | 14-3-3 family | AT3G02520 | 88.934 | 2.67e-160 | 443.0 | |
| Bial18g02236 | . | 6 | 257 | 14-3-3 family | AT2G42590 | 77.47 | 5.50e-146 | 407.0 | |
| Bial24g00614 | . | 109 | 164 | 14-3-3 family | AT1G35160 | 69.643 | 3.76e-23 | 87.8 | |
| Bial24g00613 | . | 1 | 263 | 14-3-3 family | AT1G35160 | 83.27 | 1.81e-157 | 436.0 | |
| Bial11g02162 | . | 3 | 259 | 14-3-3 family | AT3G02520 | 89.105 | 9.78e-167 | 461.0 | |
| Bial2g01043 | . | 7 | 266 | 14-3-3 family | AT1G35160 | 84.674 | 2.89e-165 | 456.0 | |
| Bial12g00662 | . | 1 | 263 | 14-3-3 family | AT1G35160 | 79.468 | 9.98e-146 | 406.0 | |
| Bial8g03221 | . | 2 | 259 | 14-3-3 family | AT1G78300 | 76.448 | 5.13e-146 | 407.0 | |
| Bial8g00361 | . | 6 | 267 | 14-3-3 family | AT1G26480 | 82.824 | 3.22e-160 | 444.0 | |
| Bial12g02347 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 3.50e-150 | 417.0 | |
| Bial4g03339 | . | 6 | 244 | 14-3-3 family | AT2G42590 | 82.008 | 1.15e-148 | 415.0 | |
| Bial23g01897 | . | 3 | 259 | 14-3-3 family | AT3G02520 | 73.541 | 4.32e-126 | 355.0 | |
| Bial6g02847 | . | 3 | 259 | 14-3-3 family | AT1G78300 | 85.214 | 1.60e-161 | 446.0 | |
| Bial24g01171 | . | 3 | 254 | 14-3-3 family | AT3G02520 | 88.492 | 1.05e-165 | 458.0 | |
| Bial13g00218 | . | 28 | 130 | 14-3-3 family | AT1G26480 | 84.466 | 6.01e-59 | 180.0 | |
| Bial13g00219 | . | 130 | 258 | 14-3-3 family | AT1G26480 | 87.692 | 1.31e-77 | 235.0 | |
| Bial24g02206 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 3.50e-150 | 417.0 | |
| Bial2g03178 | . | 6 | 256 | 14-3-3 family | AT1G26480 | 84.064 | 4.73e-160 | 443.0 | |
| Bial14g00738 | . | 7 | 266 | 14-3-3 family | AT1G35160 | 84.674 | 2.89e-165 | 456.0 | |
| Bial19g01398 | . | 3 | 257 | 14-3-3 family | AT3G02520 | 88.627 | 4.60e-167 | 461.0 | |
| Bial19g02647 | . | 1 | 247 | 14-3-3 family | AT5G65430 | 85.2 | 1.56e-159 | 441.0 | |
| Bial5g02143 | . | 6 | 257 | 14-3-3 family | AT2G42590 | 77.47 | 1.15e-145 | 407.0 | |
| Bial7g01157 | . | 1 | 262 | 14-3-3 family | AT1G35160 | 85.932 | 1.51e-163 | 452.0 | |
| Bial7g01850 | . | 3 | 257 | 14-3-3 family | AT3G02520 | 88.235 | 6.90e-167 | 460.0 | |
| Bial7g02627 | . | 1 | 247 | 14-3-3 family | AT5G65430 | 85.2 | 1.56e-159 | 441.0 | |
| Bial7g02773 | . | 3 | 258 | 14-3-3 family | AT1G78300 | 87.109 | 2.51e-164 | 453.0 | |
| Bial18g00181 | . | 33 | 260 | 14-3-3 family | AT1G26480 | 71.491 | 1.17e-113 | 323.0 | |
| Bial16g02720 | . | 30 | 241 | 14-3-3 family | AT2G42590 | 83.019 | 2.53e-132 | 370.0 | |
| Bial14g02601 | . | 3 | 259 | 14-3-3 family | AT1G78300 | 85.214 | 2.56e-162 | 448.0 | |
| Bial3g01743 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 4.55e-151 | 420.0 | |
| Bial20g00126 | . | 6 | 268 | 14-3-3 family | AT1G26480 | 82.51 | 1.78e-160 | 444.0 | |
| Bial20g02783 | . | 2 | 259 | 14-3-3 family | AT1G78300 | 76.062 | 7.13e-146 | 407.0 | |
| Bial1g00167 | . | 6 | 258 | 14-3-3 family | AT1G26480 | 84.646 | 1.12e-156 | 438.0 | |
| Bial19g01114 | . | 1 | 262 | 14-3-3 family | AT1G35160 | 85.932 | 1.60e-161 | 449.0 |