AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial8g00363 ATGGGACATATCGAGGCCTTGAGTGGCAAATGTGGAAGCCACGAGCCCGCAAGTGGAGTCGAAAGCCACCAAGCTTCACTTTATAGGCATAAAGTACCCATTCATCATCATCACCTCTTCATCTTCAACATACTTTTTGGACTTACTACTTATAGGGTTTGTTCAAATATCAATTCTGGTTTGAAGATGTATGTGGTGGAAAGCAGAGGAGGTGCGATCGCATGCATGCTGCTTGCACTCTTCTTCCTCGGAACATGGCCCGCCATTCTAACGTTGTTGGAACGACGCGGCAGGCTGCCTCAACACACTTACCTTGACTACACATTCACCAATCTTTTGGCTGCTGTTATAATTGCCTTCACATTTGGGGAGTTTGGTCATACTAATGACGGTAAACCGAATTTTCTAGTACAACTTTCTCAGAATAATTGGCCAAGTGTTCTGTTTGCAATGGGGGGTGGGGTGGTTTTGAGTCTGGGAAATCTGTCAACACAATATGCATGGGCATTTGTCGGTTTATCGGTCACCGAAGTGATCACTTCAAGTATTACTGTTGTCATAGGTACAACTTTGAACTACTTTTTAGATGACAAGATCAACCGAGCCGAGATACTGTTCCCAGGTGTCGCGTGTTTCTTGATAGCGGTTTGTTTTGGTTCGCTTGTGCACGCGTCTAATGCCAAAGATAATGAAGCAAAGCTTGAAAGTATAGGCGCGGGTGAAAAAAGCTTAATTACTAATGGAGTAGCGAACTCGAATCCAAAAAAAGATTTGGAGTATGCAAGCGGTAAAGTCGAGAAAGCCAAAGCAGGGACTGCAAATTTTCTTATTGAACTCGAAGGCCGAAGAGCAATCAAGGTGTTTGGAAAAAGCACATTGATTGGTTTGGGCATATGTTTGTTTGCGGGCGTTTGTTTCTCTCTTTTCTCGCCGGCTTTTAATCTTGCAACGAATGACCAATGGCATACATTGGAAGACGGTGTCCCTCATTTAAGTGTCTACACTGCTTTTTTCTACTTCTCGTGCTCGTGTTTTGTCATTGCAATAATCTTAAACATTACACTCCTTTACCGCCCCGCCTTCAACTTGCCTCAATCTTCGATCCACGCGTATTTAAACGACTGGGACGGTCGAGCCTGGGCGTTACTGGCGGGATTTTTGTGTGGGTTCGGGAACGGTCTACAGTTTATGGGAGGCCAGGCTGCTGGTTATGCTGCAGCTGATGCTGTTCAGGCACTACCACTTGTGAGTACCTTTTGGGGTGTGCTCTTTTTTGGCGAATACCGCAAATCGTCTAGAAGAACATACGTGCTACTCGCAGGCATGTTATCCATGTTTATCGTGGCTGTTGGAGTTTTAATGGCGTCGTCAGGACACCGAAAACATTAA 1389 45.07 MGHIEALSGKCGSHEPASGVESHQASLYRHKVPIHHHHLFIFNILFGLTTYRVCSNINSGLKMYVVESRGGAIACMLLALFFLGTWPAILTLLERRGRLPQHTYLDYTFTNLLAAVIIAFTFGEFGHTNDGKPNFLVQLSQNNWPSVLFAMGGGVVLSLGNLSTQYAWAFVGLSVTEVITSSITVVIGTTLNYFLDDKINRAEILFPGVACFLIAVCFGSLVHASNAKDNEAKLESIGAGEKSLITNGVANSNPKKDLEYASGKVEKAKAGTANFLIELEGRRAIKVFGKSTLIGLGICLFAGVCFSLFSPAFNLATNDQWHTLEDGVPHLSVYTAFFYFSCSCFVIAIILNITLLYRPAFNLPQSSIHAYLNDWDGRAWALLAGFLCGFGNGLQFMGGQAAGYAAADAVQALPLVSTFWGVLFFGEYRKSSRRTYVLLAGMLSMFIVAVGVLMASSGHRKH 462
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial8g00363 462 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 63 461 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0022857(InterPro)|GO:0071705(InterPro)
Bial8g00363 462 Pfam Ureide permease 103 456 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial8g00363 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
187711 Bial8g00363 Bial20g00128
197918 Bial20g00128 Bial8g00363
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr8:4023408 Bial8g00364 Bial-Chr8:4053783 tandem
Bial Bial-Chr20:1454023 Bial8g00363 Bial-Chr8:4023408 wgd