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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial9g02640 ATGCCAAAAACCGTCCCATCTTTACAAGAAAACAAGAAACCGTTTCATAGAAGGAACGGTTCAGGCGAGATTCATGTATTTGAATCTGCCCGTTACTTTGAGAGCAGTTATGACACCACTCTCTCTCATAAGCATTATATGAGAGAGGGTGGTGGAAGACTGAGTCTCGATATCCCTAACACCACCAGACGAAACTCGATTCCATTACAAGCCATGATGATGGATAACCGAAACTCGGTCCCCTTACAAAGCATGCTAATGGATCAAAACCCTATGATGATCAAGAATGATATAAAGAAGCATAAACAACCAAGCTCACCAGGAGGAAAGTTGGCTCATTTCTTGAATTCTCTTTTCAACCAAACATCTAAGAAGTCTAAGTCCAAATCAAAGTCAACCACATCAACATATTCTATAAAAGATGAAGATGAGAGCCCTAGTGGTTGGAGAAGAAGGAGGAGGAGTAGCATTAGTCTTTTCAGGAGTGGAAATAGCAATTCCAACATTAATGTAAGTGACACAAAATCTACTTATTCAAAAACAACACAACCACAAGCACCAACAAAGAGTACAACAACAACTACTTACAAAGATCTTAGAACCTCTACATGTGAAATTACCAAAATGCCCCTCATTGAAAACCACAACAAGAATGAAACCCTAATGATCAAAAGTGTGTTTCCTGAGCCAAAAATAAGTAATGTAAAACATGATGATGATCATCATAAGAAGCATGATCCAACGGTGGAGATTAAAGAACTCAAAAGTTTTATTTTTGATGATGGTGGAGAGAGTGATTCAAGTTCTGATCTTTTTGAGTTAACAAATTGTGATTTGGGTTATTATTCAAGTGGTTTGCCAGTTTTTGAAACAACCCGAATGGACAACATTAAGAGGGGTGCACCAATATCTAGCTAA 918 37.91 MPKTVPSLQENKKPFHRRNGSGEIHVFESARYFESSYDTTLSHKHYMREGGGRLSLDIPNTTRRNSIPLQAMMMDNRNSVPLQSMLMDQNPMMIKNDIKKHKQPSSPGGKLAHFLNSLFNQTSKKSKSKSKSTTSTYSIKDEDESPSGWRRRRRSSISLFRSGNSNSNINVSDTKSTYSKTTQPQAPTKSTTTTTYKDLRTSTCEITKMPLIENHNKNETLMIKSVFPEPKISNVKHDDDHHKKHDPTVEIKELKSFIFDDGGESDSSSDLFELTNCDLGYYSSGLPVFETTRMDNIKRGAPISS 305
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial9g02640 305 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 28 298 IPR039621 GO:0009734(InterPro)
Bial9g02640 305 MobiDBLite consensus disorder prediction 1 21 - -
Bial9g02640 305 MobiDBLite consensus disorder prediction 158 194 - -
Bial9g02640 305 MobiDBLite consensus disorder prediction 121 194 - -
Bial9g02640 305 MobiDBLite consensus disorder prediction 121 142 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial9g02640 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
25458 Bial13g00228 Bial9g02640
31057 Bial1g00175 Bial9g02640
195251 Bial9g02640 Bial21g02609
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr1:1774699 Bial9g02640 Bial-Chr9:71225983 wgd
Bial Bial-Chr13:2546464 Bial9g02640 Bial-Chr9:71225983 wgd
Bial Bial-Chr20:1669924 Bial9g02640 Bial-Chr9:71225983 wgd
Bial Bial-Chr21:69222245 Bial9g02640 Bial-Chr9:71225983 wgd
Bial Bial-Chr8:4218282 Bial9g02640 Bial-Chr9:71225983 wgd