AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial9g02641 ATGGAGAAATCGGACGGTCTGGATATCGTTTCAATCGGAAAGTTATACGACGGTCCGTGGGAGAAGAAGTACTGGAGTTCGTCTAGGCTCGAACGTGTTCTTGAAACCGAATCCACGGCTCTTGAAGCGTGGAACCGACTCAAGAATGTTTTTCAAAATAATAAAGGCCCGCGGGTTTCTGCGTTGGAAACTCAGTTCGTGAATTTAAAGCTTCGCGACATGCCATCCCTTGAGGAATATTGCCAACGACTCAAAGAAATTGGGTCACAACTTGCTGATTTGGATTCACCCATGAATGAACAAAGATTGGTCCTCCAACTCACTCGTGGCCTACCTAGTGAATATGATGTCACTGCTGCCCTTATTAATAATTCTCTCCCATCATGGGTGGACGCATGTAACATGCTTCAATCGGATCGTGACCGACAAGCAGCACGAGAACCGGCAACTCCTCTTATCGCGGCTGCTGTTCAAGACCAAAACCCGAGCCGGCGCCCTATTCATCAACGATCAAATGCATCTCGGGGAGGCCCACGTGGTAACAATAGAAGACAAGAGCATATATTTCGGTACCACTTTACATTGATTATTCTTTTTTGTTCTCAGGGTAAAGACAGACATCCATATCCAGTTGGATATGTAGCTCATCGGGCGAATAACGGGAATATCTACAAGATGGCAATTCTTGAGGGACTTAAAGGACCTGAATTTGTGATTAGTTCCACGGATGGACAATCGTGTTCTGGTCAAACTCCAGATATTGCTTGGGAGGGCTTTCAAAAGAAAAGCAGTGTTCGCATAAAGTTTTGGCGTGGAAAGAGATTTTCATGCAAGATAGATGGTGCAGAGCTTTTTGGGTTCAAAAATCCCCAAGTAATGAGATTACTACGGGGATTGAAGGCAAATGTCAGCGAAATTACACAGAACAGTTCGCCATCTTTAGCCGTTGGCAAAGGACAGCCTGAAGGAGTAGATGAACACCATAGTAAATATCCTGATTTGCAAGTGGATTCGGTTAAAGTCAAGACTAAAGAGAAAAGAAGTAATGAACGTAAAGAAATACATGTGAAATCTGTTAGGGGGCCTGGACGTAAAAGAGAACGACCTCAAGATCTGATACAAAGTGGTCAAGAACCACATACCAGGCAGAGTTTTGATGGGAGTCATAACAATGGGGTTCTTTCAAGTTCACCAAATTTGAGTGAAAATAATACATCTCATTTATTACCAACAGAAGAAGGGATTCAGGTTGATTCAGTTATTTCATCTTATCATCTTGAAAAAGAGAAACATTGTTCTGTTCAAGAAGCAATCACTGAAGAAGGTGCAAAGTTGTTAAAAAGCCAGGAAAATATTATATTATTCTCTGTAGACAGTTTATGCAATTTGGAGGTGGAGATCCCCAAAGAAAGTACCTGCGCATTAAATGAAAAGTTAAAATCTTCTCAAATTTTAGTTTCTGAACAATGTGTAACCGATTCTCAGTCAAAAGATGAGACGGGTATTGCTACTGGAAGTGATCTTTATGACAAGAGTGACTCAGATCCAGCTGGACGGGATATATCCAACTCAATGATAGCATTATTACTTCCAAGAGCTCTTCCTTTGCTTAAAACTTTCTCAAGAAAGAAAAAGAAAAATACTAATGGAATGTCTCAGAAGGAAAGAAAGGAGGTTGACCAAATTCTTAAAGATGAACCTCCAGCCAAATCTTCTGAGCATTTGGAAAATCGCAGTGGTGAATTTAACATTCCAGACAAACCTTCTACTGAAAACGTTACATTTGAGAAGCCGAATGAAAGTGCTCTTTTTACAAGTACAAATATGGATTCAGTCGTACCTGATTTAGAAGATTCAACAACTGTTGCACCTGATAGTTTTGAGAATGATCAGTGTGAATTCATGGATGCTGTTAAAGATGATCAAAGTACTTCCACTATAAATTCATGCACCCGTGAAGTGCTCCATGAAGAACTAGAAGTTAGTGTTAACAATGTGGCTTCCATGCTAACCGCTGATCAAGAGGTAGATGGTTTGACTTCAGTTTTGCAGGGTCAAAGCATAAGTCAACATGGCACGACTAAAACGGTGCACAATGAGGAAGTTAAAGTGGTGCCTAATGATGAGATAAATAATATCTTTGAACTTGTAGGCTGTTATATGCTTCCAACACCAATTTCAATGGTAATGTTGAGAACGAAAGGGGATGAGGTATTTGTATGTGTGTTATGTGGCTACTTGATGGAAAACGAAAGGACATTGTTTATTTACAAGACATCAATTGAAGGAGAAACCAGAGGATGCCCTTCATTTATTGGTCACACAGCAATCAGCTCACCAACTTCAATGAACGCATGTGGTAAACAAATTACTTTGGATAGTTCTAGTTTACAGTTTACTCCAGATGGAAAATCCCTTGTTTTACTGAACAGCATTAAAGCTCCTTATTGCAGTGCTCCAATAGACCAATGCCATTTGTCAACATCGGATTGCATGCCTAATTGTATAGTTGAGATGAAAAGAATACCAAAATTTCCATCTCTCATTGTTGGTCACAGTGCATTTGGCGACTTTCGCTTGTGGTATCCTAGTCAACCTTTATCCACCTCAGATACTTGTAAAAAGAAACAAGTGGAAGACATTATGGAAGAAACACAAAGGTGTTGTTTAGAACCCGACAACCATAATTCTGTTCCGGTAAACGAAGGATGCCTGTCACTTGCTCTTCTTGTCTCATCTGCCTCAAATCATGATCCTTTTGATGAATGTTCACATAAAAATTTGGGAGTCGGTTCAACTGGATCATGGCGCCTTGCATTGTTGGCGAAAAATAAACTGGTTGCAGAAAAACCTTTGGATCCAAGGTAG 2868 40.38 MEKSDGLDIVSIGKLYDGPWEKKYWSSSRLERVLETESTALEAWNRLKNVFQNNKGPRVSALETQFVNLKLRDMPSLEEYCQRLKEIGSQLADLDSPMNEQRLVLQLTRGLPSEYDVTAALINNSLPSWVDACNMLQSDRDRQAAREPATPLIAAAVQDQNPSRRPIHQRSNASRGGPRGNNRRQEHIFRYHFTLIILFCSQGKDRHPYPVGYVAHRANNGNIYKMAILEGLKGPEFVISSTDGQSCSGQTPDIAWEGFQKKSSVRIKFWRGKRFSCKIDGAELFGFKNPQVMRLLRGLKANVSEITQNSSPSLAVGKGQPEGVDEHHSKYPDLQVDSVKVKTKEKRSNERKEIHVKSVRGPGRKRERPQDLIQSGQEPHTRQSFDGSHNNGVLSSSPNLSENNTSHLLPTEEGIQVDSVISSYHLEKEKHCSVQEAITEEGAKLLKSQENIILFSVDSLCNLEVEIPKESTCALNEKLKSSQILVSEQCVTDSQSKDETGIATGSDLYDKSDSDPAGRDISNSMIALLLPRALPLLKTFSRKKKKNTNGMSQKERKEVDQILKDEPPAKSSEHLENRSGEFNIPDKPSTENVTFEKPNESALFTSTNMDSVVPDLEDSTTVAPDSFENDQCEFMDAVKDDQSTSTINSCTREVLHEELEVSVNNVASMLTADQEVDGLTSVLQGQSISQHGTTKTVHNEEVKVVPNDEINNIFELVGCYMLPTPISMVMLRTKGDEVFVCVLCGYLMENERTLFIYKTSIEGETRGCPSFIGHTAISSPTSMNACGKQITLDSSSLQFTPDGKSLVLLNSIKAPYCSAPIDQCHLSTSDCMPNCIVEMKRIPKFPSLIVGHSAFGDFRLWYPSQPLSTSDTCKKKQVEDIMEETQRCCLEPDNHNSVPVNEGCLSLALLVSSASNHDPFDECSHKNLGVGSTGSWRLALLAKNKLVAEKPLDPR 955
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial9g02641 955 MobiDBLite consensus disorder prediction 321 357 - -
Bial9g02641 955 MobiDBLite consensus disorder prediction 162 179 - -
Bial9g02641 955 Pfam gag-polypeptide of LTR copia-type 28 143 - -
Bial9g02641 955 MobiDBLite consensus disorder prediction 374 411 - -
Bial9g02641 955 ProSiteProfiles FYR domain FYRC motif profile. 232 312 IPR003889 GO:0005634(InterPro)
Bial9g02641 955 MobiDBLite consensus disorder prediction 495 516 - -
Bial9g02641 955 MobiDBLite consensus disorder prediction 310 411 - -
Bial9g02641 955 Gene3D - 198 303 - -
Bial9g02641 955 MobiDBLite consensus disorder prediction 551 581 - -
Bial9g02641 955 MobiDBLite consensus disorder prediction 156 183 - -
Bial9g02641 955 Pfam F-Y rich C-terminus 234 300 IPR003889 GO:0005634(InterPro)
Bial9g02641 955 PANTHER TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1 1 671 IPR040092 GO:0005634(PANTHER)|GO:0051726(PANTHER)
Bial9g02641 955 MobiDBLite consensus disorder prediction 541 594 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial9g02641 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr9:71247488 Bial22g01034 Bial-Chr22:10240862 dispersed
Bial Bial-Chr9:71247488 Bial4g01166 Bial-Chr4:14300702 transposed