Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial9g02645 | ATGGTAGTAGAGCAGCCGACAATGACGTATCAGATGGAAAACGGTAATATTATGGAAAATCAAACTTTGTCCACCGGAAAGGAGAACAATACTGTCGTGAACCCACACTACTCTGCACAAGATGTTGCTGATGCCTTTACGAAACAATATTATAAAATTCTGCAAGAAATGCCTAAGGAGGCGTATAATTTTTATAAGGATCAAAGCACGCGAGCCCATCCATGTCTTGATGGTTCAATGAAACTAGTAACAACCCTGCAGCAGTGTATTGATGAGGAGATCATGGCTTCCAATATCAAGGAATGGAATCCTGACCTGGAAACCCTACATGCTCAGGAATCGATAATGAACTCAGTCGTCGTTGGAGTTACGGGCTATTTGATTGACAATGATGGCGTGACAAAAAACTTTGCTCAGACTTTTCTCTTAGCCACACAAGAAGGCGGTGGCTTTTATGTCCACAATGATTTTCTTCAGTTTATGGAAATCATGAAGGCACCAGAAGCTTCACCTTCTGTTGATGATGTGGAAGATCCTCTGCCTGCTCAACAAGCTGATGATTCAGCAAAAGACTCCTCCTTGGAGACTGCACAGACTGCCATCAAGGATCAAACCGAGAAGTCAGCACCTAAAAAAGAAGGAAATGATACTAAAATGAAGTTTTCCGAGGTATTAGAAGGAAAGAAGCCACTTCCGGCTGAACCAAAGAAGAAATGTCAACCTTCTGTTTGGCAGACACCTCCAAAAATCCAAGAAGATTTAAAAAAAGTGTCTTACGCGACAATTTTGGCAAAAGAAGGTTCTGCACCAACCACTGCAGACTCACCTCCAAAAGCTGTTGCAAAAGTTTCCCCAAAAACCGATAAGCCTGCAAGCACGTCTGCTGTTGTACCCAAACCATCTATGGTTCCTAACAATGGTCCTGATGAAAATATCTATGATGTCAAATCGATTCGGGTCAAGGATCTGCCACCAAAAGTTACACAGGAATCAATACTGGAGGTGGTAAAGCAGTTTGGACCAGTCAAACAGAAAAACATCCAGATTAAAGAATATGCACAGGACGGATATCGTTACGCTTTTGTTGAATTCGATCATGCAAGATCTGCCATTAGTGCAGTAGAGGCCCGTTTCATCCGACTTGATGACAAACCATGTGAAATTCAATACAAGAAACATTCTAATCAAGGTGGAAACAACATGGGGAGGCCAGCGTTTGGTCGTAGAGCTGAAAATGGTTGGCGTCGTGAGGGCGAAGGAAGTAATGGTGGCAGCTGGGGAAACAAGCACGTTGACCATGAGAACTTTGGTCAACATTCTGGTCAAACTCGAGATTATAACCAGGGGCGCAACCGTTACTATCAAGATCGTCGTTGA | 1377 | 43.06 | MVVEQPTMTYQMENGNIMENQTLSTGKENNTVVNPHYSAQDVADAFTKQYYKILQEMPKEAYNFYKDQSTRAHPCLDGSMKLVTTLQQCIDEEIMASNIKEWNPDLETLHAQESIMNSVVVGVTGYLIDNDGVTKNFAQTFLLATQEGGGFYVHNDFLQFMEIMKAPEASPSVDDVEDPLPAQQADDSAKDSSLETAQTAIKDQTEKSAPKKEGNDTKMKFSEVLEGKKPLPAEPKKKCQPSVWQTPPKIQEDLKKVSYATILAKEGSAPTTADSPPKAVAKVSPKTDKPASTSAVVPKPSMVPNNGPDENIYDVKSIRVKDLPPKVTQESILEVVKQFGPVKQKNIQIKEYAQDGYRYAFVEFDHARSAISAVEARFIRLDDKPCEIQYKKHSNQGGNNMGRPAFGRRAENGWRREGEGSNGGSWGNKHVDHENFGQHSGQTRDYNQGRNRYYQDRR | 458 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial9g02645 | 458 | MobiDBLite | consensus disorder prediction | 391 | 458 | - | - | |
| Bial9g02645 | 458 | MobiDBLite | consensus disorder prediction | 267 | 310 | - | - | |
| Bial9g02645 | 458 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 316 | 393 | IPR000504 | GO:0003723(InterPro) | |
| Bial9g02645 | 458 | SMART | rrm1-1 | 317 | 389 | IPR000504 | GO:0003723(InterPro) | |
| Bial9g02645 | 458 | Gene3D | - | 304 | 436 | IPR012677 | - | |
| Bial9g02645 | 458 | PANTHER | RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN | 32 | 437 | IPR039539 | GO:0003729(PANTHER)|GO:0005829(PANTHER)|GO:1990904(PANTHER) | |
| Bial9g02645 | 458 | MobiDBLite | consensus disorder prediction | 169 | 249 | - | - | |
| Bial9g02645 | 458 | SUPERFAMILY | NTF2-like | 38 | 160 | IPR032710 | - | |
| Bial9g02645 | 458 | Pfam | Nuclear transport factor 2 (NTF2) domain | 42 | 160 | IPR002075 | - | |
| Bial9g02645 | 458 | Pfam | RNA recognition motif | 318 | 376 | IPR000504 | GO:0003723(InterPro) | |
| Bial9g02645 | 458 | CDD | NTF2 | 38 | 160 | IPR018222 | - | |
| Bial9g02645 | 458 | ProSiteProfiles | Nuclear transport factor 2 domain profile. | 42 | 160 | IPR018222 | - | |
| Bial9g02645 | 458 | Gene3D | - | 31 | 165 | - | - | |
| Bial9g02645 | 458 | CDD | RRM-SF | 318 | 389 | - | - | |
| Bial9g02645 | 458 | MobiDBLite | consensus disorder prediction | 205 | 235 | - | - | |
| Bial9g02645 | 458 | MobiDBLite | consensus disorder prediction | 186 | 204 | - | - | |
| Bial9g02645 | 458 | SUPERFAMILY | RNA-binding domain, RBD | 299 | 422 | IPR035979 | GO:0003676(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial9g02645 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr23:41354179 | Bial9g02645 | Bial-Chr9:71295598 | dispersed | |
| Bial | Bial-Chr9:71295598 | Bial11g01216 | Bial-Chr11:48571022 | transposed |