Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi12g00272 | ATGGAGAGAAGATGGCGCGGCAGAGAACAGGTGGGAAGAGAGATTAAGGCGAGAGAGATGGCGTTCGTGAGACAAAAAACAGGGTGGAAGAAATGGCGTTTGCCAGCAACCCTAGGGCTAGGGCGAAAGAGAGTTTTTGTCATGTCCATGGATTTGAAAGAGAAAAAAGGAGATATTGCAGAGAAGCAGCAGCAAGATAGTAGTGTAAACATGATAAAAGTATCGATAAGGAGGTGCTCTTACTGTGGCAAAAGTGGCCATAATTTAAGAACATGCAATGAAAGGAATGTAGTGAGGTTGTTTGGAATAAATATTTTCGATATCGAAAGGGATGATTCAATGAAGAAGAGTGCTAGTCTGGGCAATCTAAGATCATCCATGGGTGAACTGAGCTATAAGGATCATGGTTACTTCTCTGATAGTTTCATTCAGTCTCAAAAGCCTGTTGGGAAGAAGAACAAAGGGATGCCATGGACGGAGGAAGAACACAGAACCTTTCTGGAGGGATTGCGGCGACTTGGAAAAGGTAACTGGAGAGGAATCTCAAAGAAATTTGTCCCCACCAGAACTCCAACCCAAGTGGCCAGCCATGCCCAGAAGTATTTTCTTCGGAGATGCGGCACAATGAGGACGAGGCGCCAATCCAGTCTCTTTGATATGGAGAGTAAAAAACCTGTTGCCTTCTCAGTTCAGATGGCAGGATTCTCTGGTGGGATACTGAACTACCCAGAAGCGAAAATCTACCCATCTGTATCGTTCATGTCGGCAATGAACTTCCACAGCCAAGGACAT | 792 | 45.08 | MERRWRGREQVGREIKAREMAFVRQKTGWKKWRLPATLGLGRKRVFVMSMDLKEKKGDIAEKQQQDSSVNMIKVSIRRCSYCGKSGHNLRTCNERNVVRLFGINIFDIERDDSMKKSASLGNLRSSMGELSYKDHGYFSDSFIQSQKPVGKKNKGMPWTEEEHRTFLEGLRRLGKGNWRGISKKFVPTRTPTQVASHAQKYFLRRCGTMRTRRQSSLFDMESKKPVAFSVQMAGFSGGILNYPEAKIYPSVSFMSAMNFHSQGH | 264 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi12g00272 | 264 | ProSiteProfiles | Zinc finger CCHC-type profile. | 77 | 94 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Busi12g00272 | 264 | SUPERFAMILY | Homeodomain-like | 151 | 204 | IPR009057 | - | |
| Busi12g00272 | 264 | FunFam | transcription factor MYB1R1 | 156 | 207 | - | - | |
| Busi12g00272 | 264 | CDD | SANT | 157 | 202 | IPR001005 | - | |
| Busi12g00272 | 264 | ProSiteProfiles | Myb-like domain profile. | 150 | 202 | IPR001005 | - | |
| Busi12g00272 | 264 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 77 | 225 | IPR052245 | GO:0009723(PANTHER)|GO:0009739(PANTHER) | |
| Busi12g00272 | 264 | Pfam | Myb-like DNA-binding domain | 156 | 202 | IPR001005 | - | |
| Busi12g00272 | 264 | Gene3D | - | 158 | 206 | - | - | |
| Busi12g00272 | 264 | ProSiteProfiles | SANT domain profile. | 156 | 206 | IPR017884 | - | |
| Busi12g00272 | 264 | SMART | sant | 154 | 204 | IPR001005 | - | |
| Busi12g00272 | 264 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 153 | 204 | IPR006447 | GO:0003677(InterPro) | |
| Busi12g00272 | 264 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 150 | 206 | IPR017930 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi12g00272 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Busi | Busi-Chr12:13604025 | Busi8g00504 | Busi-Chr8:6927011 | dispersed | |
| Busi | Busi-Chr12:13604025 | Busi2g02047 | Busi-Chr2:49663545 | wgd | |
| Busi | Busi-Chr12:13604025 | Busi8g00501 | Busi-Chr8:6842307 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Busi | Myb_DNA-binding | 6.2e-13 | CL0123 | TF | MYB-related |