Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi12g00325 | ATGGATTCTTCCTCTTCGTCGATTGCTCAAGGTCCGGACGACGATGTCAAACTGCCGGATCATCATTTTGCGCAATTCGGCGCTGGGTGCTTCTGGGGCGTTGAATTGGCGTTCCAGAGAGTGCCGGGAGTCACGAAGACCGAGGTTGGATACAGTCAAGGGTTGCTGCATAATCCCACTTACCGTGATGTTTGTACGGGCAAGACAAATCATTCGGAGGTTGTTAGGGTTCTGTATGATCCGAAGGAGTGCAGTTATGAGAGTTTGCTCGATATGTTTTGGTCTCGACATGATCCCACCGCGCTTAATCGTCAGGGTGAATTCCCAATGTGGGACAAATTCCAACAATTAGTTGAAGGTCTGAAGGGGGTGGTCATTCTTGATAATGTGGCGGACGATAGATTTTGGTCTCTTGAGTCAAACAGTCAGTTTTCTTGTAAATCTTGGGTGTCTCATTTTAGAAAGCCGGGAGTCACTCATAGTCCTAGATTCCCTTCCTCATTCCTTTGGAAAGCTAAAATTCCCCTAAATGTGAAAATCTTTGCATGGACGGCTATGCTTAATAGGATTAACACCCTTGACAATCTTCAAAAGAGGAGGAAAACTTGGGCTTTGTCACCAAATGCATGCATACTTTGTAAAAAGAATGCTGAATCTGTAGACCATGTTCTTTTGCATTGTGAGGTTGCTGATTTTATCTGGAAAAGGTTATTACATTTTTTAGGAGTTATGTGGGTATTACCAAAAACAGTGGGTGAGTTGACAGCACAGTGGAGGTTCCCTGGTATGTCTCTAAGAGGAAGAAGGCTGTATGACGGAGTGTTTTTTGCCTCTTTATGGAGTCCAGATGCTCTTTTGGACTCAGTGATGGGCTTGGCTGCTTTTTGGGTTTCGATTACCCCAGAATTTGGCGCTTTTGAGGTTGGGGATATTGGTAACGACGTGGGGACACAGTACAGATCTGGAATATACTTCTACACATCAGAGCAGGAGAAAGCAGCACATAATTCCATAGAACAACAGCAGAAGCTCTTGAACAGGAAGATTGTTACTGAGATTCTGCCAGCCAAAAAGTTCTACAGAGCTGAAGAATATCACCAGCAATACCTTGCAAAAGGGGGACAAAGTGGTCTCAAGCAGTCAGCTGAGAAGGGATGCAACGATCCTATCAGATGCTATGGGTAA | 1185 | 44.73 | MDSSSSSIAQGPDDDVKLPDHHFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGLLHNPTYRDVCTGKTNHSEVVRVLYDPKECSYESLLDMFWSRHDPTALNRQGEFPMWDKFQQLVEGLKGVVILDNVADDRFWSLESNSQFSCKSWVSHFRKPGVTHSPRFPSSFLWKAKIPLNVKIFAWTAMLNRINTLDNLQKRRKTWALSPNACILCKKNAESVDHVLLHCEVADFIWKRLLHFLGVMWVLPKTVGELTAQWRFPGMSLRGRRLYDGVFFASLWSPDALLDSVMGLAAFWVSITPEFGAFEVGDIGNDVGTQYRSGIYFYTSEQEKAAHNSIEQQQKLLNRKIVTEILPAKKFYRAEEYHQQYLAKGGQSGLKQSAEKGCNDPIRCYG | 394 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi12g00325 | 394 | PANTHER | MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE | 7 | 107 | IPR050162 | GO:0005737(PANTHER)|GO:0008113(PANTHER)|GO:0034599(PANTHER)|GO:0036456(PANTHER) | |
| Busi12g00325 | 394 | Gene3D | Peptide methionine sulphoxide reductase MsrA | 290 | 394 | IPR036509 | GO:0008113(InterPro) | |
| Busi12g00325 | 394 | Pfam | zinc-binding in reverse transcriptase | 144 | 234 | IPR026960 | - | |
| Busi12g00325 | 394 | Gene3D | Peptide methionine sulphoxide reductase MsrA | 2 | 109 | IPR036509 | GO:0008113(InterPro) | |
| Busi12g00325 | 394 | Pfam | Peptide methionine sulfoxide reductase | 24 | 107 | IPR002569 | GO:0008113(InterPro) | |
| Busi12g00325 | 394 | Pfam | Peptide methionine sulfoxide reductase | 307 | 373 | IPR002569 | GO:0008113(InterPro) | |
| Busi12g00325 | 394 | SUPERFAMILY | Peptide methionine sulfoxide reductase | 19 | 106 | IPR036509 | GO:0008113(InterPro) | |
| Busi12g00325 | 394 | NCBIfam | peptide-methionine (S)-S-oxide reductase MsrA | 24 | 107 | IPR002569 | GO:0008113(InterPro) | |
| Busi12g00325 | 394 | SUPERFAMILY | Peptide methionine sulfoxide reductase | 306 | 375 | IPR036509 | GO:0008113(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi12g00325 | K07304 | peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Busi | Busi-Chr12:15176390 | Busi5g00124 | Busi-Chr5:5189076 | dispersed | |
| Busi | Busi-Chr12:15176390 | Busi7g01612 | Busi-Chr7:35598053 | wgd | |
| Busi | Busi-Chr12:15176390 | Busi8g00487 | Busi-Chr8:6607263 | wgd |