AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi12g00352 | ATGGGTCTGAAACTCAGTTTTTCTGATGTTCTTGTGTGTCTTCTGGTGCTCTTACCTGCTCTGTGTAGCTCTGACGACTTTGAGCGCTCGAGAGCAACTTATTATGGCACCCGAGATGGCTTAGGGACCCCAAGTGGGGCATGTGGATATGGTGCATATGGACAACGCATCAACTATGGACATGTCAGCGCTGTGTCGAGGGAGCTGTTCGGATATGGCACTGGCTGTGGTGCCTGCTACCAGGTTAAGTGCACAATACCAAACTTGTGCACCAACGACGGCGTCGAGATCGTAGTGACTGACCATGGAGAAGGACACCATACTGACTTCATCCTCAGTCCCGGTGGATTCGAAACACTGGCGCTGCCTAACAAGGCCACGGAATTGAAGGCTGAAGGTGTAATTGACATTGAATATAGGAGGATCCCATGCAAATATCCTGGTAAGAACCTTGAACTTATGATTCAGGAACACAGCAACTTTCCAGGGTACTTGGCCATAGTTATACTGTTCCAAGGTGGTCAAAAGGACATCCTAGCCTTTGAAATTTGTCAGATTTGCGATGAAGGGTGCTTGAATTCCGACGAGGGATTAGAGTTCGAAAAAACACTAGATGAGTCCAGAGTCATTATGGTAAATTCTAAGCAATGGATGAGAATGCGCAAATCCTACGGTGCAGTTTGGGACTTGGAGAATCCTCCAAAGGGAGATCTTAGGGTGAGGCTCGTAGTGGCCGGCAATGGCAAAGTAGAATTGGTAGAGTTGATGAAGGTGTTACCTGGTGAATGGAAGGTTGGGGAGGCTTATAATTTCGACTTTCAGTTTGATTGA | 831 | 47.29 | MGLKLSFSDVLVCLLVLLPALCSSDDFERSRATYYGTRDGLGTPSGACGYGAYGQRINYGHVSAVSRELFGYGTGCGACYQVKCTIPNLCTNDGVEIVVTDHGEGHHTDFILSPGGFETLALPNKATELKAEGVIDIEYRRIPCKYPGKNLELMIQEHSNFPGYLAIVILFQGGQKDILAFEICQICDEGCLNSDEGLEFEKTLDESRVIMVNSKQWMRMRKSYGAVWDLENPPKGDLRVRLVVAGNGKVELVELMKVLPGEWKVGEAYNFDFQFD | 276 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi12g00352 | 276 | PRINTS | Expansin-Lol pI family signature | 26 | 41 | IPR007118 | GO:0005576(InterPro) | |
| Busi12g00352 | 276 | PRINTS | Expansin-Lol pI family signature | 66 | 84 | IPR007118 | GO:0005576(InterPro) | |
| Busi12g00352 | 276 | PRINTS | Expansin-Lol pI family signature | 44 | 62 | IPR007118 | GO:0005576(InterPro) | |
| Busi12g00352 | 276 | PRINTS | Expansin-Lol pI family signature | 257 | 271 | IPR007118 | GO:0005576(InterPro) | |
| Busi12g00352 | 276 | PRINTS | Expansin-Lol pI family signature | 217 | 231 | IPR007118 | GO:0005576(InterPro) | |
| Busi12g00352 | 276 | Gene3D | - | 146 | 275 | IPR036749 | - | |
| Busi12g00352 | 276 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 45 | 149 | IPR007112 | - | |
| Busi12g00352 | 276 | Gene3D | - | 19 | 145 | IPR036908 | - | |
| Busi12g00352 | 276 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 163 | 271 | IPR007117 | - | |
| Busi12g00352 | 276 | Pfam | Lytic transglycolase | 63 | 139 | IPR009009 | - | |
| Busi12g00352 | 276 | Pfam | Expansin C-terminal domain | 154 | 258 | IPR007117 | - | |
| Busi12g00352 | 276 | SUPERFAMILY | PHL pollen allergen | 209 | 270 | IPR036749 | - | |
| Busi12g00352 | 276 | PANTHER | EXPANSIN-B3 | 11 | 275 | - | - | |
| Busi12g00352 | 276 | SUPERFAMILY | Barwin-like endoglucanases | 13 | 148 | IPR036908 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi12g00352 | K20628 | expansin |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Busi | Busi-Chr12:17000218 | Busi12g00352 | Busi-Chr12:17348868 | dispersed | |
| Busi | Busi-Chr12:17169530 | Busi12g00352 | Busi-Chr12:17348868 | dispersed | |
| Busi | Busi-Chr12:17348868 | Busi4g01435 | Busi-Chr4:31354611 | dispersed | |
| Busi | Busi-Chr12:17261737 | Busi12g00352 | Busi-Chr12:17348868 | tandem |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Busi10g00574 | . | 4 | 260 | Expansin gene family | AT4G28250 | 72.868 | 7.19e-142 | 397.0 | |
| Busi10g00578 | . | 154 | 261 | Expansin gene family | AT4G28250 | 69.725 | 5.18e-52 | 166.0 | |
| Busi10g01624 | . | 1 | 249 | Expansin gene family | AT4G17030 | 52.988 | 1.38e-90 | 266.0 | |
| Busi10g01672 | . | 12 | 249 | Expansin gene family | AT4G17030 | 43.852 | 1.33e-58 | 186.0 | |
| Busi10g01674 | . | 1 | 249 | Expansin gene family | AT4G17030 | 50.598 | 2.32e-81 | 242.0 | |
| Busi11g01919 | . | 1 | 265 | Expansin gene family | AT3G45970 | 61.887 | 6.24e-112 | 321.0 | |
| Busi12g00243 | . | 84 | 249 | Expansin gene family | AT4G17030 | 43.373 | 1.69e-46 | 150.0 | |
| Busi12g00244 | . | 7 | 247 | Expansin gene family | AT4G17030 | 48.347 | 1.15e-81 | 243.0 | |
| Busi12g00245 | . | 10 | 244 | Expansin gene family | AT4G17030 | 44.068 | 1.74e-63 | 197.0 | |
| Busi12g00248 | . | 10 | 244 | Expansin gene family | AT4G17030 | 47.177 | 5.41e-79 | 237.0 | |
| Busi12g00347 | . | 10 | 244 | Expansin gene family | AT4G17030 | 50.213 | 1.92e-83 | 248.0 | |
| Busi12g00349 | . | 46 | 185 | Expansin gene family | AT4G17030 | 50.714 | 1.27e-43 | 143.0 | |
| Busi12g00350 | . | 10 | 244 | Expansin gene family | AT4G17030 | 47.881 | 1.45e-79 | 238.0 | |
| Busi12g00352 | . | 10 | 244 | Expansin gene family | AT4G17030 | 45.594 | 3.04e-77 | 233.0 | |
| Busi12g00440 | . | 6 | 247 | Expansin gene family | AT4G17030 | 42.857 | 6.21e-62 | 193.0 | |
| Busi12g00449 | . | 182 | 244 | Expansin gene family | AT4G17030 | 34.921 | 3.12e-13 | 60.5 | |
| Busi12g00450 | . | 82 | 141 | Expansin gene family | AT4G17030 | 45.0 | 3.50e-13 | 63.5 | |
| Busi12g00548 | . | 25 | 65 | Expansin gene family | AT1G65680 | 48.78 | 1.16e-06 | 43.5 | |
| Busi12g00549 | . | 25 | 273 | Expansin gene family | AT1G65680 | 58.233 | 3.19e-103 | 300.0 | |
| Busi12g00550 | . | 25 | 273 | Expansin gene family | AT1G65680 | 57.831 | 2.13e-104 | 303.0 | |
| Busi12g00559 | . | 66 | 273 | Expansin gene family | AT1G65680 | 54.795 | 8.22e-79 | 236.0 | |
| Busi12g00798 | . | 13 | 262 | Expansin gene family | AT1G12560 | 68.11 | 1.62e-126 | 358.0 | |
| Busi13g00485 | . | 68 | 153 | Expansin gene family | AT2G45110 | 36.264 | 2.20e-09 | 52.0 | |
| Busi13g00796 | . | 1 | 249 | Expansin gene family | AT4G17030 | 51.793 | 3.94e-89 | 262.0 | |
| Busi14g00006 | . | 5 | 254 | Expansin gene family | AT4G38210 | 64.0 | 4.14e-120 | 341.0 | |
| Busi14g00745 | . | 25 | 273 | Expansin gene family | AT1G65680 | 57.831 | 1.76e-99 | 290.0 | |
| Busi14g01366 | . | 1 | 153 | Expansin gene family | AT2G45110 | 29.814 | 5.88e-08 | 48.9 | |
| Busi1g00343 | . | 93 | 249 | Expansin gene family | AT4G17030 | 52.532 | 1.79e-55 | 174.0 | |
| Busi1g00778 | . | 53 | 258 | Expansin gene family | AT3G55500 | 68.932 | 6.67e-103 | 297.0 | |
| Busi1g01190 | . | 3 | 155 | Expansin gene family | AT2G39700 | 81.046 | 5.59e-94 | 272.0 | |
| Busi1g01198 | . | 3 | 155 | Expansin gene family | AT2G39700 | 81.699 | 1.89e-94 | 273.0 | |
| Busi1g01199 | . | 148 | 256 | Expansin gene family | AT2G39700 | 83.486 | 4.31e-63 | 191.0 | |
| Busi1g01542 | . | 11 | 253 | Expansin gene family | AT2G40610 | 83.539 | 7.19e-153 | 424.0 | |
| Busi2g00614 | . | 1 | 252 | Expansin gene family | AT2G03090 | 76.984 | 3.09e-146 | 407.0 | |
| Busi2g00900 | . | 14 | 253 | Expansin gene family | AT2G40610 | 80.165 | 2.79e-142 | 401.0 | |
| Busi2g01273 | . | 155 | 256 | Expansin gene family | AT2G39700 | 87.255 | 1.61e-61 | 187.0 | |
| Busi3g00876 | . | 5 | 252 | Expansin gene family | AT2G03090 | 83.065 | 1.58e-158 | 439.0 | |
| Busi3g01397 | . | 39 | 163 | Expansin gene family | AT3G03220 | 85.6 | 1.76e-78 | 240.0 | |
| Busi4g00670 | . | 24 | 226 | Expansin gene family | AT3G15370 | 67.488 | 1.09e-105 | 303.0 | |
| Busi4g01435 | . | 12 | 246 | Expansin gene family | AT4G17030 | 55.696 | 4.79e-91 | 267.0 | |
| Busi4g01436 | . | 12 | 249 | Expansin gene family | AT4G17030 | 56.25 | 2.68e-92 | 270.0 | |
| Busi4g01437 | . | 12 | 249 | Expansin gene family | AT4G17030 | 54.583 | 8.01e-90 | 264.0 | |
| Busi4g01438 | . | 12 | 87 | Expansin gene family | AT4G17030 | 62.338 | 4.30e-25 | 93.6 | |
| Busi5g00477 | . | 58 | 256 | Expansin gene family | AT5G39300 | 66.0 | 5.37e-102 | 294.0 | |
| Busi6g00018 | . | 153 | 224 | Expansin gene family | AT4G01630 | 73.611 | 6.86e-34 | 120.0 | |
| Busi6g01503 | . | 61 | 265 | Expansin gene family | AT5G39310 | 68.293 | 2.00e-106 | 309.0 | |
| Busi7g01171 | . | 12 | 218 | Expansin gene family | AT4G17030 | 58.373 | 3.90e-84 | 248.0 | |
| Busi7g01220 | . | 12 | 249 | Expansin gene family | AT4G17030 | 55.833 | 4.58e-92 | 270.0 | |
| Busi7g01221 | . | 46 | 249 | Expansin gene family | AT4G17030 | 52.683 | 8.32e-76 | 227.0 | |
| Busi8g00148 | . | 1 | 159 | Expansin gene family | AT1G12560 | 60.366 | 2.81e-62 | 194.0 | |
| Busi8g00431 | . | 29 | 253 | Expansin gene family | AT1G65680 | 52.0 | 2.35e-73 | 222.0 | |
| Busi8g00675 | . | 24 | 247 | Expansin gene family | AT4G17030 | 41.85 | 1.76e-56 | 179.0 | |
| Busi8g01168 | . | 1 | 249 | Expansin gene family | AT4G17030 | 45.418 | 4.10e-67 | 205.0 | |
| Busi8g01176 | . | 94 | 249 | Expansin gene family | AT4G17030 | 42.675 | 2.15e-38 | 130.0 | |
| Busi8g01180 | . | 1 | 249 | Expansin gene family | AT4G17030 | 52.191 | 8.10e-87 | 256.0 | |
| Busi8g01185 | . | 1 | 249 | Expansin gene family | AT4G17030 | 50.198 | 2.14e-86 | 255.0 | |
| Busi8g01186 | . | 1 | 249 | Expansin gene family | AT4G17030 | 50.198 | 5.63e-85 | 252.0 | |
| Busi8g01187 | . | 1 | 249 | Expansin gene family | AT4G17030 | 52.59 | 7.59e-90 | 264.0 | |
| Busi8g01188 | . | 1 | 249 | Expansin gene family | AT4G17030 | 50.988 | 5.53e-88 | 259.0 | |
| Busi8g01189 | . | 1 | 249 | Expansin gene family | AT4G17030 | 53.785 | 8.00e-92 | 269.0 | |
| Busi8g01190 | . | 1 | 249 | Expansin gene family | AT4G17030 | 50.988 | 4.15e-86 | 254.0 | |
| Busi9g00029 | . | 5 | 254 | Expansin gene family | AT4G38210 | 62.016 | 2.14e-118 | 337.0 | |
| Busi9g00194 | . | 16 | 252 | Expansin gene family | AT1G20190 | 78.903 | 7.29e-144 | 401.0 |