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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi12g00387 ATGGACTCTTTGACCTTCCGGGGACCGATGAGACGGCCTACTTTCATCGAAGATGATGATGGTTTGGCTTCTGTTGCAGACATGGAGGCTGGGTTCTCTGGGAATCATCCGATCTTCACGAAATCTTCTTGTTTTAATGCGTCAAGGAGGAAGGGGAGTTTCAGATCTCTTTCTTTCGCTTCTGCGTCTTCACCGCGGTCGTCCAGGTTCTATGACGTTAAGTACGAAGAACCCCATTTCCTTGAAGCCTGTTTTCTCTGCAAGAAGCCATTAGGAAATAACAGAGACATCTTCATGTACAGAGGGGACACTCCATTCTGTAGTGAAGAGTGCAGACAAGAACAAATAGAGATGGACGAAGCAAAAGAGAACTGGAACCTCTCTTCTTCCATGAAAGCATTGAGAAAAGACCAGAGGAAATCTAGCCCCAACAAGGCCCAGAATTACCCTGTAAGGGCTGGTGCTGTTGCAGCTGCTTGA 480 47.08 MDSLTFRGPMRRPTFIEDDDGLASVADMEAGFSGNHPIFTKSSCFNASRRKGSFRSLSFASASSPRSSRFYDVKYEEPHFLEACFLCKKPLGNNRDIFMYRGDTPFCSEECRQEQIEMDEAKENWNLSSSMKALRKDQRKSSPNKAQNYPVRAGAVAAA 159
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi12g00387 159 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 53 157 IPR044533 -
Busi12g00387 159 ProSiteProfiles Zinc finger FLZ-type profile. 79 123 IPR007650 -
Busi12g00387 159 MobiDBLite consensus disorder prediction 122 159 - -
Busi12g00387 159 Pfam zinc-finger of the FCS-type, C2-C2 74 122 IPR007650 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi12g00387 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Busi Busi-Chr12:18667955 Busi8g01148 Busi-Chr8:18080652 dispersed
Busi Busi-Chr12:18667955 Busi11g00975 Busi-Chr11:42069987 transposed