Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi12g00410 | ATGTATAGAGAACGTGGCGCTGGTGGATCAAAGTCTGAGATCGGTCACATCGATCGGAAAAGGATTAATGAAGCCCTAGATAAGCTAGTGGAGAAATCTTCTCCTTCGACTTCTAAGGGAATAAACGGCAAAGACAAGGATAGACTATCTGTGCCGTCCACTTCCGCCGGCAAGCAGCCTCACGATCACAGAGATACTCGAGCGTCTCTCCCCAAGAATAAATGCTCTGATGGTGCAATCACTTCAGAGATCAGTGAAAGTGAGTTGATACCGTTGGTTGGCATGGTTTTTGCCACTGAAGAGGACGGTTTTAGATTTTATAAGGAATATGCCAGAAGCACTGGGTTTGGTATTAGAAGAGATACCGTTCACAGAAGAAAGGATACAGGGGTCATTTTTGATAGAATTTTTTGCTGTTCAAGAGAAGGTCATTGGCGACATGATAAAAGAGATACGGAAGTTCAAAAGCACCGTGCTGAGACCAGGATTGGTTGTATGGCACGATTGAGGATTTTGATGAATGGCGAGGGAAAATTTGTGGTGTCGCAATTTGAACCAAAGCATAATCATCAGTTACTTTTGCCTAAGATGGCTCATATGTTAAGATCTCATAGGCAAGTAAGTGAGATCCAGGCTACGGAAATCGATTTAGCAGATAAAACAGGAATTGCGCCGAAAGCAATTGTAGAACTTATGCAAAGAGAAGCTGGGGGTGTTGATACTCTTGGATTTATGCATGCGGATTGTCAAAACTATTTGCGTTCGAAACGCACGACTGCCATAGAAGCTGGGCAGGCAGGGGCCTTGATTCAATATTTTGTTAAGAGGCAGGTAGAGGATCAATCATTTTTCTATTCTATTGAGCTCGACACTGAAGATTTGATAACAAGTCTTTTTTGGGCGGATGGAGGAATGATAGAGGATTATAAGGCTTTCGGTGACGTTGTATGTTTCGATACAACATATAAGACGAATAAGGAGGGCCGTATTTTTGGATTATTTGTTGGGGTAAATCATCATAGACAAAGTATTGTCTTTGGAGCAGCCTTACTTTATGATGAAACAATACCGACGTTTTGCTGGCTCTTCAAAACATTTGTTACAGCTATGTCTAGGAAAGAACCAAGAACACTTCTCACTGATCATGATCAAGCAATGACAAGTGCAATTGCTTGTGTATTACCAAGAACGTATCATCGTTTTTGTGTGTGGCACATGTTTCAGACCGCGGCAAAACATCTAAGTGATGTGTTTAATCGTGAGAAATCTTTTGCAAATGAATTTTCACGATGTGTGTACGAGTATGAGAATGAAGATGAGTTTGTGGATGCGTGGAATGCGATGATTACCAAATATAATCTGTCTGACAATAGTTGGTTGTAG | 1383 | 41.36 | MYRERGAGGSKSEIGHIDRKRINEALDKLVEKSSPSTSKGINGKDKDRLSVPSTSAGKQPHDHRDTRASLPKNKCSDGAITSEISESELIPLVGMVFATEEDGFRFYKEYARSTGFGIRRDTVHRRKDTGVIFDRIFCCSREGHWRHDKRDTEVQKHRAETRIGCMARLRILMNGEGKFVVSQFEPKHNHQLLLPKMAHMLRSHRQVSEIQATEIDLADKTGIAPKAIVELMQREAGGVDTLGFMHADCQNYLRSKRTTAIEAGQAGALIQYFVKRQVEDQSFFYSIELDTEDLITSLFWADGGMIEDYKAFGDVVCFDTTYKTNKEGRIFGLFVGVNHHRQSIVFGAALLYDETIPTFCWLFKTFVTAMSRKEPRTLLTDHDQAMTSAIACVLPRTYHRFCVWHMFQTAAKHLSDVFNREKSFANEFSRCVYEYENEDEFVDAWNAMITKYNLSDNSWL | 460 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi12g00410 | 460 | Pfam | MULE transposase domain | 315 | 408 | IPR018289 | - | |
| Busi12g00410 | 460 | Pfam | FAR1 DNA-binding domain | 105 | 193 | IPR004330 | - | |
| Busi12g00410 | 460 | MobiDBLite | consensus disorder prediction | 26 | 77 | - | - | |
| Busi12g00410 | 460 | PANTHER | PROTEIN FAR1-RELATED SEQUENCE 10-RELATED | 91 | 460 | IPR031052 | GO:0006355(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi12g00410 | K17604 | zinc finger SWIM domain-containing protein 3 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Busi | Busi-Chr12:19283337 | Busi13g00220 | Busi-Chr13:9500224 | dispersed | |
| Busi | Busi-Chr13:19967755 | Busi12g00410 | Busi-Chr12:19283337 | dispersed | |
| Busi | Busi-Chr8:17787836 | Busi12g00410 | Busi-Chr12:19283337 | dispersed | |
| Busi | Busi-Chr12:19179576 | Busi12g00410 | Busi-Chr12:19283337 | proximal | |
| Busi | Busi-Chr1:69230275 | Busi12g00410 | Busi-Chr12:19283337 | wgd | |
| Busi | Busi-Chr12:19283337 | Busi2g02327 | Busi-Chr2:72497404 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Busi | MULE | 2.2e-25 | CL0219 | TF | FAR1 |