AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi12g00528 ATGGATTCTCAGAGAGCTCTATTAGATGAACTCATGGGCGCTGCCCGTAATCTTACTGAAGAAGAGAAGAAGGGATTCAAGGAAATACGCTGGGATGATAAGGAAGTTTGCGGATATTATATGGTTCGATTTTGTCCTCACGATTTGTTTGTTAACACTCGGAGTGATCTGGGTCCATGCCCTAGAATACATGATCCGAAGCTGAAAGAAAGTTTTGAGAAGTCATCAAGACATGACTTGCATGCACGCAGATTTGAAGCTGAACTTGCTCAGTTTTGCGAGAAACTGGTGTTGGACTTGGATAGAAGAGTAAGGCGTGGTCGCGAACGCCTGGCTCAAGAACTGGAAGTGACACCTCCTCCTATTTCAGCTGAAAAATCTGAACAATTATCTGTGCTGGAGGAGAAGATAAAGAACCTGTTGGAGCAAGTGGAGACACTTGGTGAAGCCGGAAAGGTGGATGAAGCTGAGGCACTCATGAGGAAGGTAGATATGCTCAATGCTGAGAAGGCTGCCTTGACTCAACAACCACAGAATGAAAAAGTATTGATGCTTACACAGGAGAAAAAGATGGCATTGTGCGAGATTTGTGGTTCTTTCTTGGTGGCAAATGATGCCGCAGAGAGGATGCAGTCTCATGTGACGGGCAAGCAGCATATTGGCTACGGAATGGTTCGGGATTTCATCAATGAGCACAAGGCGGCTAAGGAGAAAGCAAGAGAAGAGGAAAGACTGGCAAAGGAGAAAGAAGCAGAAGAGCGCAGAAAGCAGAGGGAAAAGGAAAATGGAAGTAGGGACAAAAGAAGTCACTCAGGGGAGAGAGATAGATATCATGATCGGGATCAAGATAAGGAGCGTAATCGATACCGAGAACGTGACCGCATTCGTGGAAGTTCTCATGAGTTGAGTGGCAGAGGAAGCCGGGATGGAGGGAGAGGGATAGACTGGAAGTCTAACCACCACAAGAATGGAAGAGACAGGGGTAGAGACCAGTACCATGACCACAATAGGAACATGGAAAGAGGTAGAGATGTGAGTAGATCACGATCCCCTGTTCGCATGAAGTCATCAAGGAGTCCAGATCATGGATATTAA 1095 46.21 MDSQRALLDELMGAARNLTEEEKKGFKEIRWDDKEVCGYYMVRFCPHDLFVNTRSDLGPCPRIHDPKLKESFEKSSRHDLHARRFEAELAQFCEKLVLDLDRRVRRGRERLAQELEVTPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVDMLNAEKAALTQQPQNEKVLMLTQEKKMALCEICGSFLVANDAAERMQSHVTGKQHIGYGMVRDFINEHKAAKEKAREEERLAKEKEAEERRKQREKENGSRDKRSHSGERDRYHDRDQDKERNRYRERDRIRGSSHELSGRGSRDGGRGIDWKSNHHKNGRDRGRDQYHDHNRNMERGRDVSRSRSPVRMKSSRSPDHGY 364
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi12g00528 364 Pfam LUC7 N-terminus 2 249 IPR004882 GO:0003729(InterPro)|GO:0005685(InterPro)|GO:0006376(InterPro)
Busi12g00528 364 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 347 IPR004882 GO:0003729(PANTHER)|GO:0003729(InterPro)|GO:0005685(InterPro)|GO:0005685(PANTHER)|GO:0006376(PANTHER)|GO:0006376(InterPro)|GO:0071004(PANTHER)
Busi12g00528 364 Coils Coil 123 150 - -
Busi12g00528 364 Coils Coil 1 21 - -
Busi12g00528 364 Coils Coil 225 262 - -
Busi12g00528 364 MobiDBLite consensus disorder prediction 233 364 - -
Busi12g00528 364 Coils Coil 156 176 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi12g00528 K13212 RNA-binding protein Luc7-like 2
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Busi Busi-Chr12:28568873 Busi8g00400 Busi-Chr8:5581972 dispersed