AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi12g00555 ATGGTTTTGTCGCAGAAGATCCATGAAGCCTTCAAGGGGACAGTTGAAAGGATTACAGGACCTCGTACGGTTTCTGCATTCAAGGAAAAAGGTGTTCTTAGCATCAGTGAATTCGTTATTGCTGGGGACAATCTCGTCGCCAAATGCCCTACGTGGTCTTGGGAATCGGGTGAGCCGAGCAAGAGGAGGTCATACTTGCCTCCTGACAAGCAATACTTAATTACGAGAAACGTGCCTTGTTTAAGAAGGGCTGCATCTGTTGAAGAAGAAAATGAAGCTATTGGAGGGGAAGTTCTTCTTGACAATGAAGACGGTGATGGTTGGCTGGCAACTCATGGCAAGCCTAAAGATACTAAGTGTGATGATGAGGACAATTTACCTTCTATGGAGACCTTAGACATCAGCAAAAAAAAGAGTTTTCAGTCAATCCCATCATATTTTGGGGGTGAGGAGGAAGAGGATATTCCTGATATGGCAGAGTATGAAGAACCTGACAACGTCATTGAAACAGATGATGCAACTCTACATTCTACATATCTTGTGGCTCATGAACCTGATGAGGACCATATTCTACGGACACGAACCTATGATGTCAGCATCACGTATGATAAGTATTATCAAACACCCCGTGTCTGGCTTACTGGGTATGATGAGTCAAGGATGCTTTTACAACCAGAGCTTGTACTTGAAGATGTTAGTCAAGACCATGCCCACAAAACGGTGACCATAGAGGACCATCCCCATTTGCCTGGGAAGCATGCATCTGTACATCCATGCCGACATGGGGCTGTGATGAAAAAGATCATTGATGTACTAATGTCTCGTGGAGTTGAGCCACAAGTTGATAAGTATCTTTTCTTGTTCTTGAAATTTATGGCCTCTCTAATTCCAACTATTGAATATGACTACACCATGGACTTCGATCTTGGTAGCTCCAGCAATTGA 945 43.6 MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSISEFVIAGDNLVAKCPTWSWESGEPSKRRSYLPPDKQYLITRNVPCLRRAASVEEENEAIGGEVLLDNEDGDGWLATHGKPKDTKCDDEDNLPSMETLDISKKKSFQSIPSYFGGEEEEDIPDMAEYEEPDNVIETDDATLHSTYLVAHEPDEDHILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAHKTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPQVDKYLFLFLKFMASLIPTIEYDYTMDFDLGSSSN 314
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi12g00555 314 Gene3D - 155 298 - -
Busi12g00555 314 Pfam Autophagocytosis associated protein, active-site domain 37 303 IPR007135 GO:0019787(InterPro)
Busi12g00555 314 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 3 308 IPR046962 GO:0000045(PANTHER)|GO:0000407(PANTHER)|GO:0000422(PANTHER)|GO:0005829(PANTHER)|GO:0019776(PANTHER)|GO:0044804(PANTHER)|GO:0141046(InterPro)
Busi12g00555 314 FunFam Autophagy-related protein 3 162 299 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi12g00555 K08343 ubiquitin-like-conjugating enzyme ATG3