Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi12g00556 | ATGACGAATCGCCGCTTCTGTTCCCTCGTCTTCCTCGTCGCCTTCCTCTCCGCTGCTGCAGGTGACTCTGATGAGTGTGTTTACACACTGTACATCAAAACAGGGTCCATCTTCAAAGCTGGAACCGACTCCAACATCAGCATCACTCTCGGAGATTCCGCCGGCCGGTCGGTGTGGATCCCGAATGTACAGGCCTGGGGTATGATGGGATCCCGCCATGACTACTTCGAGACGGGAAATCTCGACATTTTCAGTGGCAGAGGCCCCTGCATAGGAGCTCCCCTCTGCCGTCTACAGGTGGTGTCGGACGGTACCGGATCTCATCATGGGTGGTACTGCAGCTCCGTTGAGGTCACGTCCTCCGGGCCTGACAAGGGTTGCAGCCAGACCCTGTTTTACGTCAACCAGTGGCTCGCCACTGATGCAGCCCCCTACTCCCTGAAAGCTGTTGTTGATGGGTGCTTGAATGGAGAAGCTACTCCGGCGAAGCGTGATGAAGAGACAGGGCGTCTTGTTGTTGGGTTTAATCATCAGGGATCTGCTTCACAGTGA | 552 | 55.8 | MTNRRFCSLVFLVAFLSAAAGDSDECVYTLYIKTGSIFKAGTDSNISITLGDSAGRSVWIPNVQAWGMMGSRHDYFETGNLDIFSGRGPCIGAPLCRLQVVSDGTGSHHGWYCSSVEVTSSGPDKGCSQTLFYVNQWLATDAAPYSLKAVVDGCLNGEATPAKRDEETGRLVVGFNHQGSASQ | 183 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi12g00556 | 183 | Gene3D | PLAT-LH2 domain | 16 | 144 | - | - | |
| Busi12g00556 | 183 | ProSiteProfiles | PLAT domain profile. | 26 | 152 | IPR001024 | GO:0005515(InterPro) | |
| Busi12g00556 | 183 | Pfam | Embryo-specific protein 3, (ATS3) | 19 | 138 | IPR010417 | - | |
| Busi12g00556 | 183 | PANTHER | PLAT DOMAIN-CONTAINING PROTEIN | 21 | 159 | - | - | |
| Busi12g00556 | 183 | SUPERFAMILY | Lipase-lipooxygenase domain (PLAT-LH2 domain) | 27 | 141 | IPR036392 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi12g00556 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Busi | Busi-Chr11:41827161 | Busi12g00556 | Busi-Chr12:28955054 | dispersed | |
| Busi | Busi-Chr11:41832363 | Busi12g00556 | Busi-Chr12:28955054 | dispersed | |
| Busi | Busi-Chr12:28955054 | Busi8g00870 | Busi-Chr8:13434900 | wgd |