AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi12g00575 ATGCCGTCCATATTTGGACTTCTTGGCTTTATTCGAGACGTGATTTTCGTAGATTCGGCGATGCCGCTTGTGAGATTTGTTCCGACTTCAGAATTGTGGACTGACATTGGCAGAAACTTTAATAAATTGGGAGGCGATTTGAGCCAGAGAGTTGATCTCTATCCTGTTTTCTTTGATTACGTGTCGGATCAGATGGCGGAGGAGTCTTCCCAATCGCAGTACGTGAAGCTTACGAAGGAACAAGCGTCTGTGGAGGATATCACGCCTGGCGAACTCAATCAGCCTATCGAGGTCTGTAAGTTCCGATATCTTAGCTTTAAATCGATTTCACATGTTGCTCTTGATATTTTTGGAGAGGTTTCGTTAACCTTTAACCACTTCAATGGACAGTTGACGTTCACAAATGCAGAGAGTGTGGACAGCCTCTACCTGAAAACTATGAGCCCCCTGCCGATGAAGCTTGGACAACTGGGATTTTTGGGCTGGACTGGACTGTTTTGTCCATGTGTGTTGTTTGGGCGTAATATTGAAGCCATGAGAGATGTCCCTTGGACAGGGCCATGTCTCTGTCATGCCATCTTTGTTGAAGGTGGCATGGCACTTGCAGTGGCAACAGCAATCTTCCATGGTATCAACCCAAGAACATCATTTCTTATTGGTGAGGGTCTATTATTTGCTTGGTGGATGTGTGGAATCTACACCGGTCTCTCTCGGCGATCATTGCAGAGGAAATATCATCTCCAGAACTCCCCCTGTGACTCGTGCATGGTGCATTGTTGCTTGCACTGGTGTGCCTTGTGTCAGGAGCAAAGGGAGATGAAAGGACGTCTCTCCGATAATGTCGTTATGCCAATGACAATCATCAATCCTCCACCTGTACAGGAGATGAACGCAAGTGAGAACCAGGTGTCCACACCATCTACAGTGAGCAGTGTTGAACACAATAATCTGGAATTGCAGCCCTTGTAG 969 46.54 MPSIFGLLGFIRDVIFVDSAMPLVRFVPTSELWTDIGRNFNKLGGDLSQRVDLYPVFFDYVSDQMAEESSQSQYVKLTKEQASVEDITPGELNQPIEVCKFRYLSFKSISHVALDIFGEVSLTFNHFNGQLTFTNAESVDSLYLKTMSPLPMKLGQLGFLGWTGLFCPCVLFGRNIEAMRDVPWTGPCLCHAIFVEGGMALAVATAIFHGINPRTSFLIGEGLLFAWWMCGIYTGLSRRSLQRKYHLQNSPCDSCMVHCCLHWCALCQEQREMKGRLSDNVVMPMTIINPPPVQEMNASENQVSTPSTVSSVEHNNLELQPL 322
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi12g00575 322 MobiDBLite consensus disorder prediction 294 322 - -
Busi12g00575 322 PANTHER DUF614 FAMILY PROTEIN-RELATED 161 277 IPR006461 -
Busi12g00575 322 Pfam PLAC8 family 162 272 IPR006461 -
Busi12g00575 322 NCBIfam PCR-CNR family Cys-rich domain 162 274 IPR006461 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi12g00575 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Busi Busi-Chr12:29234267 Busi8g00617 Busi-Chr8:8425628 dispersed
Busi Busi-Chr1:66261538 Busi12g00575 Busi-Chr12:29234267 transposed
Busi Busi-Chr12:29234267 Busi8g00614 Busi-Chr8:8372057 wgd