Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi12g00611 | ATGGTGCAGCAGCATCTGCTGCCGTTATCGAGCCAGGGACATTCTCTTCTTCTTCCGCAGAACAATCTTTTGCTGAGGACTACTGCCCTTGGCAAGGGCACCCTTGCCTTTAAACATCTGCAGTGTCATCCGATCTATAGCTCTAATTGTCCTGGCAGTGTAAGGGCAGTTTCAACGAACGAACTTCCCCCAAATGCCCTTCGCCGGAAGACGGACCCACTGTGGCGTGGAGGGTTCAGCTTGGGTGTAGACCTCGGACTGTCTCGCACCGGCGTTGCTCTCAGCAAAGGTTTCTCAATCCGTCCCTTAACTGTTTTGGAATTAAGAGGGAAGAAGCTCGAGATTCGTCTCCTCGAGATTGCAGAACGAGAGGAAGCTGATGAATTTATAATCGGGCTTCCTAAATCGCGTGATGGGAAGGAGACACCTCAGTCGAACAAGGTTCGTAGTGTTGCAGGAAGGCTTGCTGTTCAAGCTGCAGAGAGGGGTTGGAGGGTATACCTGCAGGATGAACATGGAACATCAACAGATGCCGTCGACCTTATGATTGACATGGGCCTCAGAAAGTCTGCTCGCCAAGAACGTCTTGATGCTTATGCTGCCATGATGATATTGGAGAGATATTTCTCCATTTCGGGTCACGGAACTGAACTTGTTCTTCCCAAGCAGTCAGAACTTCAAGAAAAGCTAAGAAAGGGTCCAGCCAAGGACTTGGATCTTTTCCCTGAAGATTATGAAGATAGATGA | 747 | 49.4 | MVQQHLLPLSSQGHSLLLPQNNLLLRTTALGKGTLAFKHLQCHPIYSSNCPGSVRAVSTNELPPNALRRKTDPLWRGGFSLGVDLGLSRTGVALSKGFSIRPLTVLELRGKKLEIRLLEIAEREEADEFIIGLPKSRDGKETPQSNKVRSVAGRLAVQAAERGWRVYLQDEHGTSTDAVDLMIDMGLRKSARQERLDAYAAMMILERYFSISGHGTELVLPKQSELQEKLRKGPAKDLDLFPEDYEDR | 248 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi12g00611 | 248 | CDD | YqgF | 81 | 209 | IPR005227 | GO:0006364(InterPro) | |
| Busi12g00611 | 248 | Hamap | Putative pre-16S rRNA nuclease [yqgF]. | 78 | 213 | IPR005227 | GO:0006364(InterPro) | |
| Busi12g00611 | 248 | SMART | rnase-8s | 78 | 178 | IPR006641 | GO:0006139(InterPro) | |
| Busi12g00611 | 248 | FunFam | Holliday junction resolvase | 80 | 217 | - | - | |
| Busi12g00611 | 248 | PANTHER | POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN | 66 | 210 | IPR005227 | GO:0000967(PANTHER)|GO:0006364(InterPro) | |
| Busi12g00611 | 248 | Gene3D | - | 80 | 216 | IPR037027 | GO:0006139(InterPro) | |
| Busi12g00611 | 248 | Pfam | Holliday junction resolvase | 80 | 210 | IPR005227 | GO:0006364(InterPro) | |
| Busi12g00611 | 248 | SUPERFAMILY | Ribonuclease H-like | 79 | 210 | IPR012337 | - | |
| Busi12g00611 | 248 | NCBIfam | Holliday junction resolvase RuvX | 81 | 209 | IPR005227 | GO:0006364(InterPro) | |
| Busi12g00611 | 248 | MobiDBLite | consensus disorder prediction | 229 | 248 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi12g00611 | K07447 | putative pre-16S rRNA nuclease [EC:3.1.-.-] |