AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi12g00611 ATGGTGCAGCAGCATCTGCTGCCGTTATCGAGCCAGGGACATTCTCTTCTTCTTCCGCAGAACAATCTTTTGCTGAGGACTACTGCCCTTGGCAAGGGCACCCTTGCCTTTAAACATCTGCAGTGTCATCCGATCTATAGCTCTAATTGTCCTGGCAGTGTAAGGGCAGTTTCAACGAACGAACTTCCCCCAAATGCCCTTCGCCGGAAGACGGACCCACTGTGGCGTGGAGGGTTCAGCTTGGGTGTAGACCTCGGACTGTCTCGCACCGGCGTTGCTCTCAGCAAAGGTTTCTCAATCCGTCCCTTAACTGTTTTGGAATTAAGAGGGAAGAAGCTCGAGATTCGTCTCCTCGAGATTGCAGAACGAGAGGAAGCTGATGAATTTATAATCGGGCTTCCTAAATCGCGTGATGGGAAGGAGACACCTCAGTCGAACAAGGTTCGTAGTGTTGCAGGAAGGCTTGCTGTTCAAGCTGCAGAGAGGGGTTGGAGGGTATACCTGCAGGATGAACATGGAACATCAACAGATGCCGTCGACCTTATGATTGACATGGGCCTCAGAAAGTCTGCTCGCCAAGAACGTCTTGATGCTTATGCTGCCATGATGATATTGGAGAGATATTTCTCCATTTCGGGTCACGGAACTGAACTTGTTCTTCCCAAGCAGTCAGAACTTCAAGAAAAGCTAAGAAAGGGTCCAGCCAAGGACTTGGATCTTTTCCCTGAAGATTATGAAGATAGATGA 747 49.4 MVQQHLLPLSSQGHSLLLPQNNLLLRTTALGKGTLAFKHLQCHPIYSSNCPGSVRAVSTNELPPNALRRKTDPLWRGGFSLGVDLGLSRTGVALSKGFSIRPLTVLELRGKKLEIRLLEIAEREEADEFIIGLPKSRDGKETPQSNKVRSVAGRLAVQAAERGWRVYLQDEHGTSTDAVDLMIDMGLRKSARQERLDAYAAMMILERYFSISGHGTELVLPKQSELQEKLRKGPAKDLDLFPEDYEDR 248
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi12g00611 248 CDD YqgF 81 209 IPR005227 GO:0006364(InterPro)
Busi12g00611 248 Hamap Putative pre-16S rRNA nuclease [yqgF]. 78 213 IPR005227 GO:0006364(InterPro)
Busi12g00611 248 SMART rnase-8s 78 178 IPR006641 GO:0006139(InterPro)
Busi12g00611 248 FunFam Holliday junction resolvase 80 217 - -
Busi12g00611 248 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 66 210 IPR005227 GO:0000967(PANTHER)|GO:0006364(InterPro)
Busi12g00611 248 Gene3D - 80 216 IPR037027 GO:0006139(InterPro)
Busi12g00611 248 Pfam Holliday junction resolvase 80 210 IPR005227 GO:0006364(InterPro)
Busi12g00611 248 SUPERFAMILY Ribonuclease H-like 79 210 IPR012337 -
Busi12g00611 248 NCBIfam Holliday junction resolvase RuvX 81 209 IPR005227 GO:0006364(InterPro)
Busi12g00611 248 MobiDBLite consensus disorder prediction 229 248 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi12g00611 K07447 putative pre-16S rRNA nuclease [EC:3.1.-.-]