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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi12g00612 ATGCATGAGACATTGCCCGAGTGGCGCGACAAGTTTGTCTCCTACAAGGATTTGAAGAAGCTTGTTAGGCTTATCTCTTCTGCTTCATCATCATTTAAGGGGCAGCTGCCATATCCAAGGAAGGATGAAGCAAAGTTTTTGTTCTTGTTGAACATTGAGATTGATAAGTTTAATACCTTCTTCGCCGAGAAGGAAGAAGAATTCATCATTCGCCATAAAGAGTTACAACAGAGAATCCAGGTGGTTATGGATACATGGGGTCTGAACGGGAGCCGGCCGTCCGAGGATGATTACAGAGAAGAAATGGGGAAGATCAGAAAGGACATTATTAATTTACATGGAGAAATGGATTGGCTAAGATCTTGA 366 42.35 MHETLPEWRDKFVSYKDLKKLVRLISSASSSFKGQLPYPRKDEAKFLFLLNIEIDKFNTFFAEKEEEFIIRHKELQQRIQVVMDTWGLNGSRPSEDDYREEMGKIRKDIINLHGEMDWLRS 121
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi12g00612 121 ProSiteProfiles SPX domain profile. 1 121 IPR004331 -
Busi12g00612 121 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 2 116 IPR031142 GO:0016036(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi12g00612 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Busi Busi-Chr12:27806571 Busi12g00612 Busi-Chr12:29771375 dispersed
Busi Busi-Chr12:29771375 Busi6g00008 Busi-Chr6:144097 dispersed
Busi Busi-Chr12:29771375 Busi8g00412 Busi-Chr8:5618840 wgd