AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi12g00641 ATGGCACTGTTTCGGGTTTTTGTGCTGTTCTTAACCCACATTATTTTATTTACAAGCCTCTGTTTCGGCGCTGATCCTTCTCACGTATGGGATGTTTCATACATCACTGTCGCTCCGTTGGGCGTTGAACAACAGGTTATAGCGATTAATGGCGTGTTTCCGGGTCCTACCATTAATGTGATTACTAACGATAATGTTGTTGTTAACATAACAAATAATTTGGATGAAGATCTTCTGTTTACTTGGGTTGGTGTTCAGCAAAGACGAAATTCGTGGCAAGATGGTGTCCCAGGCACCAATTGTCCTATCCCTGCAGGTTGGAAATGGTCATACCAGTTTCAACTTAAGGATCAGATTGGAAGCTTCTTTTACTTCCCGTCGCTCAATTTTCAGAGAGCAGCGGGTGGCTATGGCGGTTTTATCATAACTAACAGGCCTGTGATACCAGTTCCTTTTGCAACTCCAGATGGGGATATAACCATCTTTATTGGTGACTGGTACACCCGAAATCATACGGAGCTGAGACAGACCCTTGACGATGGAAATGACCTTGGGATGCCTGATGGAGTTCTCATTAATGGGAAGGGTCCTTTCAGATACAATACCACACTGGTTCCAGATGGCATTCCTCATGAAACTATTGAAGTCCAACCAGGTAAAACTTACCGCATTCGTGTACACAATGTTGGAATCTCAACTAGTTTGAACTTCAGGATTCAGAACCATAATTTGCTTCTTGCTGAGACGGAGGGATCATACACAATTCAACAAAATTATACAAACTTAGATATACATGTTGGACAGTCTTATTCTTTTTTGGTTAACATGGATCAGAATGCAAGTACAGATTACTACATTGTTGCAAGTGCTAGGTTCGTGAATGAATCACTTTGGAAAAGGGTTACTGGTGTTGCCATCTTGCACTATACCAATTCAAAGGGAAATGCAACCGGTCCTCTTCCAGACCCACCAAACGATCAGTATGACAAGTCATTTTCAATGAACCAGGCAAGATCCATCAGGTGGAATGTTTCTGCTAGTGGTGCTCGCCCTAACCCACAGGGATCTTTTAGGTATGGTTCAATCAATGTGACTGATGTATATATGTTGAAGAACAAGCCAGCCGTCATGATTAATGCGAAACGGCATTTTACACTCAATGGGATCTCATTTGTCAATCCTGAGACTCCAATAAAGCTTGCTGATGAGTTTCATGTAGGGGGAGTTTACAAGCTTGATTTCCCTAATGGGTCACTTGCTGAGCCACCCAGGATGGAAACATCAGTGATCAATGCAACATATAAGGGATTTATAGAAGTCATACTACAGAACAATGATACTGTAATGCAGAGCTATCACATGGACGGTTATGCATTCTTTGTGGTTGGGATGGATTATGGGGAATGGACAAATAACAGCAGGGGATCGTATAATAAGTGGGATGCAGTTGCTCGTTCTACAGTACAGGTTTTCCCCGGAGCATGGACAGCAATACTGATCTCTCTTGATAATGTTGGAGTGTGGAACCTGAGAACAGAAAACCTAGACAGATGGTATCTTGGCCAAGAAACATATGTCAGGATTGTTAATCCTGAGGCTAACACAACCGAATTGCCAATACCAGATAATGCCCTCTTTTGTGGTGCCCTCAAATCCAAGCAGAAGCCGCAGGAATCATCTGCAATGTCAATCAAAGGTGGAAGTTCAAAGCTATTCTTTGCTCTGCCTGTGGTGCTTTTCGTTGCAATCTTTGTTTTCCATTAA 1764 42.46 MALFRVFVLFLTHIILFTSLCFGADPSHVWDVSYITVAPLGVEQQVIAINGVFPGPTINVITNDNVVVNITNNLDEDLLFTWVGVQQRRNSWQDGVPGTNCPIPAGWKWSYQFQLKDQIGSFFYFPSLNFQRAAGGYGGFIITNRPVIPVPFATPDGDITIFIGDWYTRNHTELRQTLDDGNDLGMPDGVLINGKGPFRYNTTLVPDGIPHETIEVQPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTIQQNYTNLDIHVGQSYSFLVNMDQNASTDYYIVASARFVNESLWKRVTGVAILHYTNSKGNATGPLPDPPNDQYDKSFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTDVYMLKNKPAVMINAKRHFTLNGISFVNPETPIKLADEFHVGGVYKLDFPNGSLAEPPRMETSVINATYKGFIEVILQNNDTVMQSYHMDGYAFFVVGMDYGEWTNNSRGSYNKWDAVARSTVQVFPGAWTAILISLDNVGVWNLRTENLDRWYLGQETYVRIVNPEANTTELPIPDNALFCGALKSKQKPQESSAMSIKGGSSKLFFALPVVLFVAIFVFH 587
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi12g00641 587 Pfam Multicopper oxidase 32 145 IPR011707 GO:0005507(InterPro)
Busi12g00641 587 SUPERFAMILY Cupredoxins 28 172 IPR008972 -
Busi12g00641 587 FunFam Monocopper oxidase-like protein 361 558 - -
Busi12g00641 587 CDD CuRO-1-AAO-like-1 28 142 IPR034273 GO:0005507(InterPro)
Busi12g00641 587 FunFam Monocopper oxidase-like protein 156 349 - -
Busi12g00641 587 Pfam Multicopper oxidase 158 311 IPR001117 -
Busi12g00641 587 Gene3D - 156 349 IPR008972 -
Busi12g00641 587 SUPERFAMILY Cupredoxins 377 548 IPR008972 -
Busi12g00641 587 Gene3D - 23 144 IPR008972 -
Busi12g00641 587 PANTHER MULTI-COPPER OXIDASE 30 538 IPR045087 GO:0016491(PANTHER)|GO:0046658(PANTHER)
Busi12g00641 587 SUPERFAMILY Cupredoxins 152 351 IPR008972 -
Busi12g00641 587 Pfam Multicopper oxidase 396 532 IPR011706 GO:0005507(InterPro)|GO:0016491(InterPro)
Busi12g00641 587 Gene3D - 361 560 IPR008972 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi12g00641 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Busi Busi-Chr10:22044502 Busi12g00641 Busi-Chr12:30336852 dispersed
Busi Busi-Chr12:30336852 Busi6g01271 Busi-Chr6:16162095 dispersed
Busi Busi-Chr12:30336852 Busi8g00360 Busi-Chr8:5002691 wgd