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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi1g00051 ATGGCCGTTGCGAGCTTCCATTCTGTGTCGCCTTCACTTTTTGCGTCTCCTCTCAGGTTCTCAAGCTGCTCCTCGGCGGACTTTTGTGTTTCATGCTGTTCTTTACAATTCCCTTCGTCTCCGCTTGCCAAAACCCTCACAGCAATTGAGACCTCTGGCGTTATCGCCTGCCTTCGCGCCAGCAGTGGGGAGCTGGCAATGGAAGCTGCACGTGCTGCACTTAGTGGAGGAGTCTCAGTTCTGGAGATTGTGACAACCACTCCAGTTGTTCTGAGACTGGTAGGGATCTTACAGGTTGGAACTGTCCTAAACATTGGGGATGCGAGAAAAGCAATAGGAGCTGGGGCGAAGTTCCTCATGAGTCCTGCAACAGTTAAGGATATCCTGGAAAATATTCAAGGTGATGAAGTCCTGTACATCCCTGGTGTAATGACACCTACAGAAGTCTTAACTGCATATAATTCTGGCGCAAGAATAGTCAAGGTTTATCCAGTTTCAGCATTAGGTGGTGTCCGCTACATATCAGCCCTAAAGAAGCCATTCTCTCATATCCCAATTGTCGCTTCTCAAGGCATAGCAATTGACTCAGTTGGAGCATATATTGCTGAAGGAGCATCATCAGTTGTCTTATCTGATGCTATCTTTCAGAAAGGTGCAATGGATCAACGAAATTTTGATGCTATCCATCAACTTGCTTGTCTTGCATCTCTAGAGGGGAATTTAGCTGTGAAA 732 46.72 MAVASFHSVSPSLFASPLRFSSCSSADFCVSCCSLQFPSSPLAKTLTAIETSGVIACLRASSGELAMEAARAALSGGVSVLEIVTTTPVVLRLVGILQVGTVLNIGDARKAIGAGAKFLMSPATVKDILENIQGDEVLYIPGVMTPTEVLTAYNSGARIVKVYPVSALGGVRYISALKKPFSHIPIVASQGIAIDSVGAYIAEGASSVVLSDAIFQKGAMDQRNFDAIHQLACLASLEGNLAVK 244
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi1g00051 244 SUPERFAMILY Aldolase 45 232 - -
Busi1g00051 244 Gene3D Aldolase class I 41 238 IPR013785 -
Busi1g00051 244 CDD KDPG-aldolase 49 231 IPR000887 GO:0016829(InterPro)
Busi1g00051 244 PANTHER 2-KETO-3-DEOXY-6-PHOSPHOGLUCONATE ALDOLASE 22 243 IPR000887 GO:0016829(InterPro)
Busi1g00051 244 Pfam KDPG and KHG aldolase 50 231 IPR000887 GO:0016829(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi1g00051 - -