AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi1g01652 ATGGATGTAAGAGAAGCAGCAGCAGCAGCGACGGCGGGAGAAGATGAATTGATATGGAGTAGGGAGACAGTCCCTCGTGTTTTACAGATTGTGAGCCCTAGACTTCCTCAGAAAGACATCCTCTCTCTCCTCCTCGTTAGTCCATGGCTGTACCGTAATCTCGTCTCCTGCCCGTCTCTATGGAAGGTTCTTGATCTGCATGAGATGAATAATGCTGGAAATCTACTTATATCTGCTCTTTCACTGTCCAGATACCAATATATCAAAGAGATAAACCTCGAATTCGCACAAGGCATCGAAGACAGACATCTTGAAATCCTTAAAAGCGAGTGTATGGACTCACTTCAAGAATTGGAAACTTTGAATCTGAATGGCTGCCAAAAGATCTCTGATAAGGGAATTGAAGCTATAAGTAGTTCTTGCCCAAAACTCAAGATCTTATCCATCTATTGGAATGTTAGGGTAACAGATTTAGGTATACAGCATATGGTGGTGAACTGCAGACATTTGGTCGATCTGAACTTGAGTGGCTGTAAGAATATTACAGATAAAAGTTTGCAACTAATTGCTGATAATTACAATGAACTGAAGTTCTTGAATTTGACAAGATGTGTCAAATTATCAGATACTGGATTGCAACAGATATTACTCAAGTGTTCTTCTCTCCAAAGTCTAAATCTTTATGCCCTGTCTAGTTTTACAGATGAAGCTTACAAGAAGATTGGGTGTCTAACTCAGCTTAGGTTCCTTGATCTCTGTGGTGCACAGAATCTGTCTGATCAAGGTCTTTCCTGCATAGCTAAATGCAAGGATCTTTCATCTCTTAACTTGACATGGTGTGTACGTGTTACCTATGCGGGGGTCATCGATATTGCACAAGGTTGCACCTCTCTTCAGTTTCTTAGCTTGTTTGGAATCGTGGGAGTAACTGATAAATGTCTGGAGATCCTTGCAAAGTTCTGTGCAAACACACTTACAACCCTTGATGTGAATGGGTGTGTTGGCATTAAGAGACGGAGCCGTGAGGAACTACTTCTACTGTTCCCACATCTGAAGTGCTTCAAAGTGCATAGCTAA 1077 41.5 MDVREAAAAATAGEDELIWSRETVPRVLQIVSPRLPQKDILSLLLVSPWLYRNLVSCPSLWKVLDLHEMNNAGNLLISALSLSRYQYIKEINLEFAQGIEDRHLEILKSECMDSLQELETLNLNGCQKISDKGIEAISSSCPKLKILSIYWNVRVTDLGIQHMVVNCRHLVDLNLSGCKNITDKSLQLIADNYNELKFLNLTRCVKLSDTGLQQILLKCSSLQSLNLYALSSFTDEAYKKIGCLTQLRFLDLCGAQNLSDQGLSCIAKCKDLSSLNLTWCVRVTYAGVIDIAQGCTSLQFLSLFGIVGVTDKCLEILAKFCANTLTTLDVNGCVGIKRRSREELLLLFPHLKCFKVHS 358
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi1g01652 358 Coils Coil 104 124 - -
Busi1g01652 358 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 194 342 IPR050648 GO:0005737(PANTHER)
Busi1g01652 358 Gene3D Ribonuclease Inhibitor 155 238 IPR032675 -
Busi1g01652 358 Gene3D Ribonuclease Inhibitor 61 154 IPR032675 -
Busi1g01652 358 FunFam Leucine Rich Repeat family protein 207 358 - -
Busi1g01652 358 Pfam Leucine Rich repeat 269 292 IPR001611 GO:0005515(InterPro)
Busi1g01652 358 Pfam Leucine Rich repeat 118 138 IPR001611 GO:0005515(InterPro)
Busi1g01652 358 Pfam Leucine Rich repeat 166 190 IPR001611 GO:0005515(InterPro)
Busi1g01652 358 SUPERFAMILY RNI-like 80 339 - -
Busi1g01652 358 Gene3D Ribonuclease Inhibitor 244 358 IPR032675 -
Busi1g01652 358 SMART LRR-CC-2 141 166 IPR006553 -
Busi1g01652 358 SMART LRR-CC-2 295 320 IPR006553 -
Busi1g01652 358 SMART LRR-CC-2 270 294 IPR006553 -
Busi1g01652 358 SMART LRR-CC-2 219 244 IPR006553 -
Busi1g01652 358 SMART LRR-CC-2 167 192 IPR006553 -
Busi1g01652 358 SMART LRR-CC-2 193 218 IPR006553 -
Busi1g01652 358 SMART LRR-CC-2 245 269 IPR006553 -
Busi1g01652 358 SMART LRR-CC-2 115 140 IPR006553 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi1g01652 - -