AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi1g02574 ATGGTGGTCTTACTTAGGAAATTGTATGATTGTGAGGGAAGAACCATAGGGGCAAAGCCAAGTGAGGCTAAAGAGGAGGGTGTAGGAGTCACCAATGCCTTTGGTAGTGCAAGGACTGGTGGAGGCAAAACTAAGCATGAGGTGACTATTGGAGCCAAACAGTGGGGAATTATAGGAAGAGATGGTTGTATTGTTGGTTGTGCTGATGGTGAAGATGATGATGTTTGTAATGTTCTACTGGAACAAGAAGCAATCGAGTTGAAGAAAAAGTTTTCCACCCCAAGAGTTTCGATGTTGGAGGATGCTGATACTGGTGAAGTGGAAGATATAGATGTTATTCCGAATGAGGAAATGATTTTGGCTCTTAGTGAAAAAGGTTACATAAAGCGGATGAGGCCCAACACCTTTAATCTGCAACATCGTGGAACTATTGGGAAGTCTGTTGGAAAAATGAGGGTTAATGATGCCATGGTTGACTTCCTGGTTTGTCATGCTCATGATCATGTTTTATACTTCAGTGATAAGGGAATTGTATATTCATATCGTGCCTATAAAATTCCAGAGTGCTCCCGGACTGCTGCAGGCACACCTTTGGTCCAGATATTATCTTTATCTGAAGGGGAGAGGATAACTTCAATTATTCCTGTAAGTGAGTTTGCTCAAGACCAGTTTCTAGTAATGCTTACATTGAATGGCTACATCAAGAAAGTCTCATTGAACTTCTTTTCGGCAATAAGAGCAACAGGAATAATAGCGATTCAGCTGGTTCCTGGTGACAAGCTAAAATGGGTTCGGTGCTGCACCAATGATGATCTTGTTGCTATGGCTTCTCAGAATGGAATGGTTATTCTCAGTTCATGTGAATCTGTAAGTTCTCTTGCAATTTTTTGGGCTGCTGGGCACGAATAG 909 41.8 MVVLLRKLYDCEGRTIGAKPSEAKEEGVGVTNAFGSARTGGGKTKHEVTIGAKQWGIIGRDGCIVGCADGEDDDVCNVLLEQEAIELKKKFSTPRVSMLEDADTGEVEDIDVIPNEEMILALSEKGYIKRMRPNTFNLQHRGTIGKSVGKMRVNDAMVDFLVCHAHDHVLYFSDKGIVYSYRAYKIPECSRTAAGTPLVQILSLSEGERITSIIPVSEFAQDQFLVMLTLNGYIKKVSLNFFSAIRATGIIAIQLVPGDKLKWVRCCTNDDLVAMASQNGMVILSSCESVSSLAIFWAAGHE 302
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi1g02574 302 Pfam DNA gyrase C-terminal domain, beta-propeller 167 217 IPR006691 GO:0003677(InterPro)|GO:0003916(InterPro)|GO:0005524(InterPro)|GO:0006265(InterPro)
Busi1g02574 302 Pfam DNA gyrase C-terminal domain, beta-propeller 224 267 IPR006691 GO:0003677(InterPro)|GO:0003916(InterPro)|GO:0005524(InterPro)|GO:0006265(InterPro)
Busi1g02574 302 Pfam DNA gyrase C-terminal domain, beta-propeller 118 163 IPR006691 GO:0003677(InterPro)|GO:0003916(InterPro)|GO:0005524(InterPro)|GO:0006265(InterPro)
Busi1g02574 302 Gene3D - 110 294 IPR035516 -
Busi1g02574 302 PANTHER DNA GYRASE-TOPOISOMERASE SUBUNIT A 76 292 IPR050220 GO:0003677(PANTHER)|GO:0003918(PANTHER)|GO:0005524(PANTHER)|GO:0005737(PANTHER)|GO:0006265(PANTHER)|GO:0009330(PANTHER)
Busi1g02574 302 SUPERFAMILY GyrA-ParC C-terminal domain-like 113 292 IPR035516 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi1g02574 - -