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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi1g02652 ATGGGGCTCTACACTACGTTCATGGAGGCAATTCCGGCCTATACAGGGCTCTCTCCGGCGGCGTTCTTCACCATCCTTGCCCTCGCGATTGCGATTTACCGACTGGTATGTGGGATGTTCGTCGCGCCCGAAGATTCAAAACGGGACAGGAGTGTTAATGCGATGGAGACGTTTAGAGTGGCTGAGCCAGTTCAGTTGGGAGAAGTTACGGAGGAGGAATTGAGAGCTTACGACGGCTCCGACCCGAAGAAACCCTTGTTAATGGCCGTCAAGGGAAATATCTATGATGTTTCTCGTTCCAGGATGTTTTATGGACCTGGTGGACCTTATGCGTTGTTTGCGGGGAGGGAAGCTAGTAGAGCCTTAGCTCTCATGTCATTTGATTCCAAGGACCTTACTGGAAACATTGAAGGTCTGAGTCAGTCAGAGCTTGAAACTCTACAGGATTGGGAATATACATTCATGGAGAAATACGTGAAGGTTGGGCAACTTGTTACTGAAAGAGCGAGATCTGGAGATGCAGCAAGTGTGCAGCAAACAGATGAAAGCGGAGATCGGGAAACTAAGAAAGAAACACAGGATCCCAGCCCTAATGTAAATGCCATACCTAAGGAGAAAGATGCAGGACAGGATTGA 636 48.74 MGLYTTFMEAIPAYTGLSPAAFFTILALAIAIYRLVCGMFVAPEDSKRDRSVNAMETFRVAEPVQLGEVTEEELRAYDGSDPKKPLLMAVKGNIYDVSRSRMFYGPGGPYALFAGREASRALALMSFDSKDLTGNIEGLSQSELETLQDWEYTFMEKYVKVGQLVTERARSGDAASVQQTDESGDRETKKETQDPSPNVNAIPKEKDAGQD 211
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi1g02652 211 FunFam Membrane steroid-binding protein 1 67 165 - -
Busi1g02652 211 Pfam Cytochrome b5-like Heme-Steroid binding domain 70 164 IPR001199 -
Busi1g02652 211 Gene3D - 67 166 IPR036400 -
Busi1g02652 211 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 5 181 IPR050577 GO:0005783(PANTHER)|GO:0012505(PANTHER)|GO:0016020(PANTHER)
Busi1g02652 211 SMART Cyt-b5-2 69 165 IPR001199 -
Busi1g02652 211 SUPERFAMILY Cytochrome b5-like heme-steroid binding domain 62 165 IPR036400 -
Busi1g02652 211 MobiDBLite consensus disorder prediction 169 211 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi1g02652 K17278 membrane-associated progesterone receptor component
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
851977 Busi Busi12g00906 Busi-Chr12:33941168 Busi1g02652 Busi-Chr1:65485306
856726 Busi Busi1g02652 Busi-Chr1:65485306 Busi7g00722 Busi-Chr7:8284342