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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi1g02686 ATGTTTATAGCAATTTTTGTTTCACTTCCATGCCTGTTTATTATTGCAGGGGCACCTGAAACCATTCAGGCTAGGTTGATTGATTTGCCATCATCATATGTTCAGACATACAAGAAATATACTCGTCAAGGATCTAGAGTTTTGGCACTTGCATACAAGCCTCTTCCAGACATGACGGTTAGTGAAGCTAGAAGCCTGGATAGAGATCTAGTGGAAAGTGGCCTTACTTTTGCTGGTTTTGCGGTTTTCAGTTGCCCCATTAAAGCTGACTCAGCTTCTGTTTTGTCTCAATTAAAAGGATCGTCGCATGACTTGGTGATGATTACAGGTGATCAAGCTTTAACTGCTTGCCATGTTGCTAGTCAAGTTCATATCATTTCAAAACAACCACTGATCCTTTGTCCGAGTAAGAGAGGTGAAGGATTTGAATGGATTTCGCCAGATGAAACAGTGACCATAAGCTACTGTGAAGAGGAGGTTGAAGCATTGTCAGAATCTCATGATCTCTGTATTGGAGGGGACTGCTTTGATATGTTTTTGCAAAGGGTTGCTCCTGAGCAGAAGGAACTTATCATGACAACTTTTAAAACTGTGGGAAGAGTAACATTAATGTGCGGAGATGGAACAAATGATGTTGGGGCTCTGAAGCAGGCACATGTAGGAGTTGCTCTCCTGAATGCAGTGCCACCCACTCAACCGGGAGTCTCATCCTCACAGACCTCAAAAACTGAAACGAAATCTGCCAAGTCAAAGAAAGCAAAGCCTGGATCGGAATCATCAAGTTCAAGCAGAAACTTAGCTATAAATGGAGACGGTCCCACGAAAGGCAGGACAACCACTCGTTCTGAAACCAGTGGCCATGTGGGGAGTAACCGCCACCTTAATGCTGCAGATATTCAGCGGGAGAAGCTAAAGAAGATCATGGATGAGATGAATGAGGAGGGTGATGGTCGCAGCCCACCCATTGTCCAGCTTGGTGATGCGTCAATGGCATCACCCTTCACTGCAAAGCATTCATCCGTGGCCCCCACCACAGACATTATTCGGCAAGGCCGGAGTACCCTGGTAACTACTCTCCAGATGTTCAAGATTCTTGGCCTCAACTGCCTTGCTACGGCCTATGTGCTCAGTGTTATGTATTTGGATGGTGTCAAGCTTGGTGATGTTCAGGCCACAATCAGTGGAATCTTTACAGCTGCCTTCTTCCTCTTTATTTCCCACGCCCGACCCCTCTCAATGCTTTCAGCTGCCCGCCCCCACCCAAACATCTTCTGTGCCTACGTATTCCTGTCTTTGATGGGACAGTTTGCTTGTCACATATTCTTTCTGATATCTGCTGTTAATGAAGCGGGCAAGTACATGCCAGATGAATGCATTGAGCCAGACTCTAACTTCCACCCCAATTTGGTAAACACAGTGTCGTACATGGTGAGCATGATGGTCCAGGTTGCAACATTTGCCGTGAACTACATGGGGCACCCTTTCAATCAGAGCATCCGTGAGAACAAGCCTTTCATGTATGCTCTGTTGGCTGCAGTGGTATTCTTCACGGTCATCACTTCGGATGTGTTCAGGAATTTGAATGACTGGCTTAAGTTGGTGCCTTTACCAGAGGCCTTAAGGGGGAAGTTGATGTTTTGGGCTTTTTTAATGTTTCTGAGCTGCTACATGTGGGAGAGGTTGTTGAGATGGGCTTTCCCTGGACGGATTCCAGAGTGGAAGAGGCGGCGACCCGTGGCTGCGTCTTCCCAGCAAAAGAAGCAACTCTAG 1770 46.5 MFIAIFVSLPCLFIIAGAPETIQARLIDLPSSYVQTYKKYTRQGSRVLALAYKPLPDMTVSEARSLDRDLVESGLTFAGFAVFSCPIKADSASVLSQLKGSSHDLVMITGDQALTACHVASQVHIISKQPLILCPSKRGEGFEWISPDETVTISYCEEEVEALSESHDLCIGGDCFDMFLQRVAPEQKELIMTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNAVPPTQPGVSSSQTSKTETKSAKSKKAKPGSESSSSSRNLAINGDGPTKGRTTTRSETSGHVGSNRHLNAADIQREKLKKIMDEMNEEGDGRSPPIVQLGDASMASPFTAKHSSVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGIFTAAFFLFISHARPLSMLSAARPHPNIFCAYVFLSLMGQFACHIFFLISAVNEAGKYMPDECIEPDSNFHPNLVNTVSYMVSMMVQVATFAVNYMGHPFNQSIRENKPFMYALLAAVVFFTVITSDVFRNLNDWLKLVPLPEALRGKLMFWAFLMFLSCYMWERLLRWAFPGRIPEWKRRRPVAASSQQKKQL 589
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi1g02686 589 MobiDBLite consensus disorder prediction 254 291 - -
Busi1g02686 589 MobiDBLite consensus disorder prediction 230 244 - -
Busi1g02686 589 PRINTS P-type cation-transporting ATPase superfamily signature 101 111 - -
Busi1g02686 589 PRINTS P-type cation-transporting ATPase superfamily signature 205 224 - -
Busi1g02686 589 SUPERFAMILY Calcium ATPase, transmembrane domain M 278 567 IPR023298 -
Busi1g02686 589 Coils Coil 294 314 - -
Busi1g02686 589 SUPERFAMILY HAD-like 37 230 IPR036412 -
Busi1g02686 589 PANTHER CATION-TRANSPORTING ATPASE-RELATED 14 567 IPR006544 GO:0006874(PANTHER)|GO:0015662(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0019829(PANTHER)|GO:0030176(PANTHER)|GO:0055085(PANTHER)|GO:0140358(InterPro)
Busi1g02686 589 ProSitePatterns Hypothetical cof family signature 2. 205 227 - -
Busi1g02686 589 Gene3D - 10 79 IPR023299 GO:0000166(InterPro)
Busi1g02686 589 MobiDBLite consensus disorder prediction 229 297 - -
Busi1g02686 589 Gene3D - 80 243 IPR023214 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi1g02686 K14950 manganese-transporting P-type ATPase [EC:7.2.2.-]
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Busi10g00023 . 1 93 Primary Pumps ATPases gene family AT1G27770 43.158 1.18e-15 69.3
Busi10g00368 . 34 383 Primary Pumps ATPases gene family AT1G15700 70.857 1.18e-179 502.0
Busi10g00487 . 442 1135 Primary Pumps ATPases gene family AT5G44240 69.801 0.0 950.0
Busi10g01629 . 782 967 Primary Pumps ATPases gene family AT5G44790 38.974 1.80e-29 117.0
Busi11g00166 . 52 110 Primary Pumps ATPases gene family AT3G01390 61.29 5.99e-16 68.2
Busi11g00605 . 4 165 Primary Pumps ATPases gene family AT1G75630 91.813 2.03e-102 290.0
Busi11g00620 . 858 948 Primary Pumps ATPases gene family AT4G30190 79.348 1.08e-45 154.0
Busi11g00738 . 90 203 Primary Pumps ATPases gene family AT5G47030 80.702 6.40e-66 199.0
Busi11g00740 . 1 89 Primary Pumps ATPases gene family AT5G47030 61.538 6.70e-32 111.0
Busi11g01252 . 208 946 Primary Pumps ATPases gene family AT1G10130 73.005 0.0 1237.0
Busi11g01260 . 208 963 Primary Pumps ATPases gene family AT1G10130 61.743 0.0 1065.0
Busi11g01657 . 1 351 Primary Pumps ATPases gene family AT3G28715 90.313 0.0 677.0
Busi11g01731 . 4 166 Primary Pumps ATPases gene family AT1G75630 100.0 7.58e-112 313.0
Busi11g01736 . 4 166 Primary Pumps ATPases gene family AT1G75630 100.0 7.58e-112 313.0
Busi11g01868 . 1 487 Primary Pumps ATPases gene family AT4G38510 87.305 0.0 887.0
Busi12g00293 . 18 955 Primary Pumps ATPases gene family AT3G60330 77.79 0.0 1501.0
Busi12g01159 . 69 186 Primary Pumps ATPases gene family AT4G11150 63.559 5.06e-48 152.0
Busi12g01160 . 1 218 Primary Pumps ATPases gene family AT4G11150 61.927 6.41e-82 240.0
Busi12g01282 . 3 1052 Primary Pumps ATPases gene family AT4G00900 75.973 0.0 1630.0
Busi13g00715 . 83 135 Primary Pumps ATPases gene family AT1G68710 71.698 1.79e-18 86.3
Busi13g00815 . 5 768 Primary Pumps ATPases gene family AT1G15690 85.995 0.0 1327.0
Busi13g01189 . 4 1213 Primary Pumps ATPases gene family AT1G17500 71.964 0.0 1840.0
Busi13g01323 . 370 967 Primary Pumps ATPases gene family AT5G44790 34.873 2.81e-100 327.0
Busi14g00556 . 1 956 Primary Pumps ATPases gene family AT5G62670 89.474 0.0 1751.0
Busi14g00697 . 13 1194 Primary Pumps ATPases gene family AT1G68710 75.676 0.0 1904.0
Busi14g00899 . 66 383 Primary Pumps ATPases gene family AT1G15700 27.401 5.99e-23 97.4
Busi14g00949 . 66 362 Primary Pumps ATPases gene family AT1G15700 26.316 1.08e-16 79.0
Busi14g01116 . 229 525 Primary Pumps ATPases gene family AT1G78900 29.114 9.84e-25 106.0
Busi14g01817 . 68 178 Primary Pumps ATPases gene family AT2G25610 94.595 9.89e-71 207.0
Busi1g00016 . 10 59 Primary Pumps ATPases gene family AT1G27770 54.0 3.61e-11 59.3
Busi1g00019 . 1 63 Primary Pumps ATPases gene family AT1G27770 52.381 2.71e-12 66.2
Busi1g00602 . 663 974 Primary Pumps ATPases gene family AT1G63440 36.25 1.49e-42 154.0
Busi1g00930 . 1 109 Primary Pumps ATPases gene family AT3G01390 61.194 5.40e-41 130.0
Busi1g01011 . 3 632 Primary Pumps ATPases gene family AT2G28520 60.502 0.0 700.0
Busi1g01061 . 1 1045 Primary Pumps ATPases gene family AT1G07670 81.166 0.0 1750.0
Busi1g01275 . 25 106 Primary Pumps ATPases gene family AT4G23710 68.293 7.11e-33 108.0
Busi1g01429 . 1 1014 Primary Pumps ATPases gene family AT4G37640 78.164 0.0 1644.0
Busi1g01570 . 36 154 Primary Pumps ATPases gene family AT2G24520 81.513 5.45e-54 180.0
Busi1g01632 . 47 151 Primary Pumps ATPases gene family AT2G24520 85.714 1.66e-47 160.0
Busi1g01801 . 75 979 Primary Pumps ATPases gene family AT1G63440 57.756 0.0 1052.0
Busi1g01900 . 58 933 Primary Pumps ATPases gene family AT3G57330 63.152 0.0 1065.0
Busi1g01904 . 927 1024 Primary Pumps ATPases gene family AT3G57330 71.569 4.52e-45 155.0
Busi1g02524 . 1 598 Primary Pumps ATPases gene family AT5G04930 66.775 0.0 837.0
Busi1g02526 . 599 1154 Primary Pumps ATPases gene family AT5G04930 63.287 0.0 743.0
Busi1g02686 . 591 1179 Primary Pumps ATPases gene family AT5G23630 66.172 0.0 807.0
Busi1g02688 . 258 544 Primary Pumps ATPases gene family AT5G23630 84.321 3.07e-167 493.0
Busi1g02726 . 42 71 Primary Pumps ATPases gene family AT2G24520 63.333 4.92e-06 46.6
Busi2g00266 . 1 196 Primary Pumps ATPases gene family AT5G13450 44.495 2.49e-54 172.0
Busi2g00860 . 1 226 Primary Pumps ATPases gene family AT4G11150 69.355 4.04e-115 327.0
Busi2g00877 . 40 1136 Primary Pumps ATPases gene family AT5G04930 57.315 0.0 1338.0
Busi2g01511 . 1 110 Primary Pumps ATPases gene family AT3G01390 79.091 1.35e-46 144.0
Busi2g01513 . 4 99 Primary Pumps ATPases gene family AT4G23710 69.792 2.82e-38 122.0
Busi2g02241 . 11 433 Primary Pumps ATPases gene family AT3G42050 78.959 0.0 720.0
Busi2g02243 . 1 86 Primary Pumps ATPases gene family AT3G42050 55.462 9.47e-33 118.0
Busi3g00109 . 1 290 Primary Pumps ATPases gene family AT1G12840 82.414 0.0 503.0
Busi3g00569 . 1 1158 Primary Pumps ATPases gene family AT3G27870 74.549 0.0 1812.0
Busi3g00743 . 1 934 Primary Pumps ATPases gene family AT5G62670 88.421 0.0 1704.0
Busi3g00955 . 13 1189 Primary Pumps ATPases gene family AT1G68710 72.434 0.0 1835.0
Busi3g01195 . 58 442 Primary Pumps ATPases gene family AT1G20260 29.219 5.61e-31 124.0
Busi4g00118 . 1 33 Primary Pumps ATPases gene family AT5G55290 72.727 4.26e-10 50.4
Busi4g00565 . 96 430 Primary Pumps ATPases gene family AT5G44240 71.884 7.92e-172 511.0
Busi4g00571 . 562 828 Primary Pumps ATPases gene family AT5G44240 75.746 3.15e-125 415.0
Busi4g01621 . 5 1211 Primary Pumps ATPases gene family AT1G72700 58.531 0.0 1510.0
Busi4g01675 . 3 1001 Primary Pumps ATPases gene family AT5G44790 70.977 0.0 1439.0
Busi5g00014 . 1 56 Primary Pumps ATPases gene family AT1G27770 60.714 4.70e-16 73.6
Busi5g00329 . 17 75 Primary Pumps ATPases gene family AT4G02620 84.746 1.62e-33 109.0
Busi5g00952 . 146 1213 Primary Pumps ATPases gene family AT1G59820 76.67 0.0 1745.0
Busi5g00961 . 11 94 Primary Pumps ATPases gene family AT1G59820 63.0 7.34e-34 122.0
Busi6g00603 . 23 1016 Primary Pumps ATPases gene family AT3G63380 70.198 0.0 1384.0
Busi7g00001 . 1 947 Primary Pumps ATPases gene family AT1G17260 71.774 0.0 1369.0
Busi7g00173 . 1 1202 Primary Pumps ATPases gene family AT1G17500 72.971 0.0 1890.0
Busi7g00902 . 93 954 Primary Pumps ATPases gene family AT1G80660 86.659 0.0 1517.0
Busi7g00975 . 407 642 Primary Pumps ATPases gene family AT1G15690 45.763 8.55e-45 155.0
Busi7g00980 . 6 770 Primary Pumps ATPases gene family AT1G15690 86.928 0.0 1354.0
Busi7g01396 . 2 706 Primary Pumps ATPases gene family AT4G30110 66.713 0.0 1007.0
Busi7g01399 . 1 623 Primary Pumps ATPases gene family AT1G78900 92.295 0.0 1201.0
Busi7g01400 . 1 623 Primary Pumps ATPases gene family AT1G78900 81.28 0.0 1011.0
Busi7g01447 . 19 755 Primary Pumps ATPases gene family AT1G16780 70.799 0.0 1138.0
Busi7g01587 . 3 948 Primary Pumps ATPases gene family AT4G30190 85.744 0.0 1637.0
Busi7g01590 . 14 948 Primary Pumps ATPases gene family AT4G30190 70.301 0.0 1264.0
Busi7g01673 . 8 1057 Primary Pumps ATPases gene family AT4G29900 69.691 0.0 1461.0
Busi8g00269 . 1 992 Primary Pumps ATPases gene family AT1G63440 74.453 0.0 1529.0
Busi8g00271 . 774 919 Primary Pumps ATPases gene family AT1G63440 74.15 6.86e-63 205.0
Busi8g00545 . 1 956 Primary Pumps ATPases gene family AT5G62670 79.378 0.0 1531.0
Busi8g01050 . 1 213 Primary Pumps ATPases gene family AT4G11150 70.892 5.12e-104 297.0
Busi8g01051 . 1 183 Primary Pumps ATPases gene family AT4G11150 74.863 5.10e-97 279.0
Busi8g01569 . 433 789 Primary Pumps ATPases gene family AT3G63380 29.722 8.62e-37 145.0
Busi9g00357 . 1 164 Primary Pumps ATPases gene family AT4G38920 98.78 3.33e-111 311.0
Busi9g00391 . 15 821 Primary Pumps ATPases gene family AT2G21410 71.864 0.0 1224.0
Busi9g00875 . 432 804 Primary Pumps ATPases gene family AT4G37270 73.529 0.0 548.0
Busi9g00971 . 1 1014 Primary Pumps ATPases gene family AT4G37640 78.912 0.0 1673.0
Busi9g01189 . 611 857 Primary Pumps ATPases gene family AT1G07670 29.032 4.60e-27 116.0
Busi9g01258 . 363 974 Primary Pumps ATPases gene family AT1G63440 35.244 2.15e-107 358.0
Busi9g01754 . 1 166 Primary Pumps ATPases gene family AT1G75630 89.189 1.99e-108 305.0
Busi9g02072 . 1 62 Primary Pumps ATPases gene family AT4G02620 64.516 1.66e-24 86.7
Busi9g02143 . 4 104 Primary Pumps ATPases gene family AT4G23710 54.455 2.01e-29 100.0