Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi1g02838 | ATGCGTGACCTTCTCATTAGCCGTTTTGGGTTCCAACCCAATGATATCGAGCTCCTGACCGATGCGCCAGGTTCAGCAGTTATGCCCACAGGTTCCAACATCATGAGCGCATTGAACCGAATGGTTGATGGAGCTGAGCCGGGTGATGTGTTGTTCTTCGACTACAGTGGGCATGGAACACGGATCCCGTCCGTGAAGCCAATGCATCCCTTTAGACAGGATGAGGCTATAGTCCCTTGTGACTTCAATCTCCTAACTGCTTTGCAGGTGACCGAGTTAACTCGGCATGGATGCACTTACGTAGACTTCCGGAAACTTGTGAACCGCTTACCAAATGGCGCAAGCTTCACCATCCTTTCAGATTCATGCCACAGTGGTGGCCTCATTGACAAGGAAAAAGAGCAAATCGGCCCTTCTTCCGAAACAAAAAACTGCCCACTATCGTCTGGTCGACCAAAATCTATCCCTTTTGAATCCATCCTGCATCACTTCAATTCCATCACCAGCGTCAGCTCATCAGACATTGGCATTCACCTGCATGAGGTTTTTGGTAGTGAAGCAAGTGTCAAGTTCAATTTAAAGGAGCGAGAACTTGAAACATTAGGGTCAGTAAGGCCTGACGCAGGAATACTACTAAGTGGGTGCCAAGCAAACGAGACTTCTGCAGACATGAATCCGACTACAGAGGGAGGGAAGGCATATGGGGCCTTCAGTAATGCTGTCCAGATGGTTTTGAAGGGGCATACAGACCCTCTCAGTAATAGAGAGTTGATCACTCTCACTAGGAAGATCTTGCAAGCACAAGGGTTTGACCAACACCCTTGCTTGTACTGCAGTGATGAGAATGCTGATGTACCTTTCTTATGGCAACCCAACCGTTGA | 882 | 48.3 | MRDLLISRFGFQPNDIELLTDAPGSAVMPTGSNIMSALNRMVDGAEPGDVLFFDYSGHGTRIPSVKPMHPFRQDEAIVPCDFNLLTALQVTELTRHGCTYVDFRKLVNRLPNGASFTILSDSCHSGGLIDKEKEQIGPSSETKNCPLSSGRPKSIPFESILHHFNSITSVSSSDIGIHLHEVFGSEASVKFNLKERELETLGSVRPDAGILLSGCQANETSADMNPTTEGGKAYGAFSNAVQMVLKGHTDPLSNRELITLTRKILQAQGFDQHPCLYCSDENADVPFLWQPNR | 293 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi1g02838 | 293 | Gene3D | - | 1 | 157 | - | - | |
| Busi1g02838 | 293 | Gene3D | - | 169 | 287 | - | - | |
| Busi1g02838 | 293 | PANTHER | METACASPASE-4 | 1 | 288 | IPR050452 | - | |
| Busi1g02838 | 293 | Pfam | Caspase domain | 1 | 280 | IPR011600 | GO:0004197(InterPro)|GO:0006508(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi1g02838 | K22684 | metacaspase-1 [EC:3.4.22.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Busi | Busi-Chr1:57420263 | Busi1g02838 | Busi-Chr1:84281717 | dispersed | |
| Busi | Busi-Chr1:84281717 | Busi10g01688 | Busi-Chr10:41512334 | wgd |