AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi8g00354 ATGGATGGAGGTTCTGATGTGGCTGAATCAAAATTGTCCTGTGCCCGATGTGGCAACCCTGCTCATCTTCAGTGTCCCAAGTGTGTAGAACTGAAGCTTCCACGTGAAGGTGCTGCATTCTGGAATTTTGTGGGGCATCTCTCCAGAAATTGCATGAAAATTTGCTTCTTCCAGATTGATAAAGTTTTGTTTGCTGGTAGCACGCAGGATTGTTTCAAAGCATCATGGGGATCCCATAAGTCAGTGCATTTAAAGGCAAAGTTATCAACTCTCAACACAGGTACTCTGGATGAACAGATTTCAGCCTCACTTAATGATGGTTGGCGATATTGTTTAAAGAAAGGCCAAGCTCGAACATCAAAACTTCCTCATTTTGATTGGACAGGGACTCTGAGGCCATATCCTATATCAAAACAGCGTTTAGTACCTGCACACATTGACAAGCCTGATTGGGCGATTGATGGGATTCCAAAAATTGAGCCCAGTAGTGATCTGCAGAATGTTGTGGAGGTTAAAACTCCAGAGAAGATTGAGAGAATGAAAGAAACATGCCGAGTAAATTGCAAGGGAGGTTTGGATGCAGCTGCTCGTGTGATTCGACCTGGTGTGACCACAGATGAAATTGATGAAGTGGTCCATGAGGCAACTATTGCTTCTGGTGGATATCCATCTCCCTTAAATTATAATTTCTTCCCAAAGTCTTGTTGCACGTCTGTTAATGAAGTTATCTGTCATGGTATTCCTGATGCGAGGAGATTAGAAGATGGTGACATTGTGAATGTTGATGTGACTGTATACTATAAAGGTGTCCATGGTGACCTTAACGAGACATTCTTTGTGGGAAAAGTTGATGAGGCATCTCAGCAGCTGGTTAAATGCACTTATGAGTGCTTGGAGAAAGCAATAGCTATCGGTACGGTTAAACCTGGAGTACGGTTTCGTGAAGTTGGAGAAATCATTAACAGACATGCATCAATGTCAGGATTCTCTGTGGTGAAATCATACTGCGGTCATGGAATTGGAGAGCTCTTCCACTGTGCACCAAATATTCCCCACTATGGAACGAAAGCAGGAAATAAAGCAGTGGGTGTGATGAAAGCAGGGCAGACCTTTACGATTGAGCCAATGATCAATGCAGGAGTCTGGCGTGATCGTATGTGGCCTGATGGATGGACAGCTGTTACTGCTGATGGCAAACGCAGCGCTCAGTTTGAACACACTCTT 1224 43.87 MDGGSDVAESKLSCARCGNPAHLQCPKCVELKLPREGAAFWNFVGHLSRNCMKICFFQIDKVLFAGSTQDCFKASWGSHKSVHLKAKLSTLNTGTLDEQISASLNDGWRYCLKKGQARTSKLPHFDWTGTLRPYPISKQRLVPAHIDKPDWAIDGIPKIEPSSDLQNVVEVKTPEKIERMKETCRVNCKGGLDAAARVIRPGVTTDEIDEVVHEATIASGGYPSPLNYNFFPKSCCTSVNEVICHGIPDARRLEDGDIVNVDVTVYYKGVHGDLNETFFVGKVDEASQQLVKCTYECLEKAIAIGTVKPGVRFREVGEIINRHASMSGFSVVKSYCGHGIGELFHCAPNIPHYGTKAGNKAVGVMKAGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTL 408
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi8g00354 408 CDD MetAP1 177 408 IPR002467 GO:0006508(InterPro)|GO:0070006(InterPro)
Busi8g00354 408 Hamap Methionine aminopeptidase [map]. 169 408 IPR002467 GO:0006508(InterPro)|GO:0070006(InterPro)
Busi8g00354 408 PRINTS Methionine aminopeptidase-1 signature 257 273 IPR001714 -
Busi8g00354 408 PRINTS Methionine aminopeptidase-1 signature 235 248 IPR001714 -
Busi8g00354 408 PRINTS Methionine aminopeptidase-1 signature 329 341 IPR001714 -
Busi8g00354 408 PRINTS Methionine aminopeptidase-1 signature 363 375 IPR001714 -
Busi8g00354 408 Pfam Metallopeptidase family M24 178 407 IPR000994 -
Busi8g00354 408 Gene3D Creatinase-methionine aminopeptidase superfamily 125 408 IPR036005 -
Busi8g00354 408 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 335 353 IPR002467 GO:0006508(InterPro)|GO:0070006(InterPro)
Busi8g00354 408 PANTHER METHIONINE AMINOPEPTIDASE 13 408 - GO:0005829(PANTHER)|GO:0035551(PANTHER)|GO:0070006(PANTHER)
Busi8g00354 408 SUPERFAMILY Creatinase-aminopeptidase 124 408 IPR036005 -
Busi8g00354 408 NCBIfam methionine aminopeptidase, type I 170 408 IPR002467 GO:0006508(InterPro)|GO:0070006(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi8g00354 K01265 methionyl aminopeptidase [EC:3.4.11.18]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Busi Busi-Chr8:4914562 Busi9g00705 Busi-Chr9:7203336 dispersed